Gene Sfum_0068 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0068 
Symbol 
ID4461158 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp84698 
End bp86773 
Gene Length2076 bp 
Protein Length691 aa 
Translation table11 
GC content58% 
IMG OID639700820 
Productelongation factor G 
Protein accessionYP_844206 
Protein GI116747519 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0480] Translation elongation factors (GTPases) 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00484] translation elongation factor EF-G 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.480211 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.213325 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGAGG ACGTTGCAGG TGTTCGTACT TTCGCAATCA TTTCCCATGG TGGTGCGGGC 
AAGACTTCCC TGGCCGAGGC CATGCTCTTC GATGCCGGTG TGACCACCCG GCTCGGCAAG
GTGGACGACA GCACCTCGGT CATGGACTAC GAACCCGAGG AGGTGAAGCG GAAGATTACG
ATCAGCACCG CATTCAATAC CCTGACCTGG AAGAAACACC AGTTCACCAT CATCGATACT
CCCGGGGACT TCAATTTCAT CGCGGAAACC AAGACATCCA TGCAGGGTGC GGATGCCGTC
CTCGTCCTGG TCGACGCCAT CGACGGCGTC AGGGTCCAAA CTGAAAAAGT GTGGGAATTT
GCCGACGAAT TCAAACAGCC GCGGATCATC TTCGTGAACA AAATGGATCG CGAGCGGGCG
GACTTCGCCA AGACCGTCGC AGACATCCAG AACAACTTCG GCAAGTCGTG CGTGCCCTTG
CAGATTCCCA TCGGGAGCGC GGAAAGCTTC AAAGGCGTGG TCGATGTGCT CAACCGGAAG
GCCTGCCTGT ACGGACATGG GGACAGCGGC AAGTTCGAGG TCAAGGAAAT GCCCGCCGAT
CTGGCCGATC AGGTGGCGCA CTACCATGAA GAATTGGTCG AACGGGTCGC CGAATCCAAT
GACGAGCTGT TGGAGAAATA TCTGGAATCC GGAGAACTGT CTCCCGAGGA AGTGAAGAAC
GCGCTTCGCG GCGCCGTGAC TTCGGGGACT CTGGTCCCCA TTGCATGCGG TTCGGGGGTT
GCCAACATCG GCATTCACGG CCTGATGGAC CTCATCGCGG ATTGTCTGCC GTCCCCGCTG
GACCGCGGAC CGCGGACCGG CAAAGGGGCC CGTGGAGCCG AGGCCGATCG CGAGCCGGAT
CCGGCTGCGC CGTTCAGCGC ACTGGTGATC AAGACCATCA GCGATCCTTA CGCCGGGCGC
CTGTCGGTGA TGCGCGTCTT CTCGGGGAGC TTGTCGCCGG ATTCGACTGT TTTCAACTCT
ACCAAGGAAA CCAAGGAAAG ATTCGGCCAG TTGCTCCGGT TGAAGGGCAA GAACCAGGAA
CCCATCCAGG GTTGCGGTCC CGGCGACGTC GTGGCGGTGG CCAAGCTCAA GGAGACGACC
ACCCAGGACA CCCTGTGTTC CGAAAAGGAC GTCATCAGCT TCCCTCCGGT GGAGCTCCCG
CCCGCCATTT ATTCGCTGGC TGTCGAGCCC AAGAGCAAGG GTGACGAGGA GAAGATTTTT
TCCTCCCTTT CCCGTCTCAT GGAAGAAGAT CTTACGCTCA AGCTCGAAAG GAATGAGGAA
ACCAAGGAGA TGATCCTGTC CGGGATGGGG GAAATCCATA TCGAGGCCAC GGTTGACAAG
CTGAAGCGCA AATTCGGCGT GGAGGTCAAT CTGCGCATCC CGAAGGTGAC GTACAAGGAA
ACGATCAAGG GGAAAGCCCG CGTCCAGGGA AAATACAAGA AGCAGTCCGG AGGCCGCGGC
CAGTACGGAG ACTGCTGGAT CGAGATGGAG CCTCTGCCCA GGGGCGAAGG CTTCCAGTTT
TATGACAAGA TCGTAGGCGG GGTGATCCCG AGACAGTACA TCCCGGCAGT GGAAAAAGGC
ATCGCCGAAG CCTTGGTGGA GGGTGCTCTG GCGGGCTATC CTGTGGTCGA TTTCAAGGTC
GATCTGGTGG ACGGCTCTTT CCACCCCGTG GACTCTTCCG AAATGGCGTT CAAAATCGCG
GGGTCGATGG CGTTCAAGAA AGCCATGATG GAAGCCAAGC CGACGCTGCT CGAGCCGATT
GTGTTGATGG AAATCACGGT TCCTGACGAT TGTATGGGAG ATATCATAGG CGACCTCAAT
TCCAGGCGCG GGCGAGTGCT TGGAATGGAG AGCAAGGGGA AAAAGCAGAT CGTCCGCGCG
AACGTGCCGC TTGCCGAAGT CCTGAAATAC GCTCCCGATT TGCGATCCAT GACGGCCGGC
AGAGGTATGT TCACGATGAA GTTTTCTCAC TATGAGGAGG TACCGGGCCA GTTGCAGGAG
AAGATCGTCG AGGCGGCCAA GGCGGAAGAA AAGTAG
 
Protein sequence
MKEDVAGVRT FAIISHGGAG KTSLAEAMLF DAGVTTRLGK VDDSTSVMDY EPEEVKRKIT 
ISTAFNTLTW KKHQFTIIDT PGDFNFIAET KTSMQGADAV LVLVDAIDGV RVQTEKVWEF
ADEFKQPRII FVNKMDRERA DFAKTVADIQ NNFGKSCVPL QIPIGSAESF KGVVDVLNRK
ACLYGHGDSG KFEVKEMPAD LADQVAHYHE ELVERVAESN DELLEKYLES GELSPEEVKN
ALRGAVTSGT LVPIACGSGV ANIGIHGLMD LIADCLPSPL DRGPRTGKGA RGAEADREPD
PAAPFSALVI KTISDPYAGR LSVMRVFSGS LSPDSTVFNS TKETKERFGQ LLRLKGKNQE
PIQGCGPGDV VAVAKLKETT TQDTLCSEKD VISFPPVELP PAIYSLAVEP KSKGDEEKIF
SSLSRLMEED LTLKLERNEE TKEMILSGMG EIHIEATVDK LKRKFGVEVN LRIPKVTYKE
TIKGKARVQG KYKKQSGGRG QYGDCWIEME PLPRGEGFQF YDKIVGGVIP RQYIPAVEKG
IAEALVEGAL AGYPVVDFKV DLVDGSFHPV DSSEMAFKIA GSMAFKKAMM EAKPTLLEPI
VLMEITVPDD CMGDIIGDLN SRRGRVLGME SKGKKQIVRA NVPLAEVLKY APDLRSMTAG
RGMFTMKFSH YEEVPGQLQE KIVEAAKAEE K