Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_0043 |
Symbol | |
ID | 4460983 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 57077 |
End bp | 59407 |
Gene Length | 2331 bp |
Protein Length | 776 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639700795 |
Product | ATP-dependent Clp protease, ATP-binding subunit clpA |
Protein accession | YP_844181 |
Protein GI | 116747494 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
TIGRFAM ID | [TIGR02639] ATP-dependent Clp protease ATP-binding subunit clpA |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00409723 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.565561 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAACA GAGAGCTTGA AATAACGCTG TCGGCCGCGA TCAAGGAGGC CAAGACCAGA CGGCATGAAT TCTTCACCCT GGAGCACGTG CTGTTCGCGA TGCTGCACGA TGTAACGGGA CGGCGCGTCC TTTTCCATTG CGGAGCGGAC CTGGAGACGT TGAAAGGGAA GCTGCTCAAG TTTTTTGAGG AGCGGGCGGA GAAGCTTCCG GAGGGCATCG ACCAGGATCC GATTCAGACC TTGAGCGTTC AGAGGGTGTT GCAGCGGGCG GTGATGCACG TGCACGGGGC CGAAAAGAAG GAAGTGGATG CCGGGGACAT ACTGGCCGCG ATGTTCTACG AAGAGAACTC TTACGCCGTC TATTTCCTGA AGTCCGAGGG CGTGAGCCGC CTGGATGTGC TGAGCTATAT TTCGCACGGC ATCTCCAAAG TCGGGTATCC CGAAGAGGAT GAGGGGGCCC GGGACGAGCC TGCACACGAG GTCGCGCCCG GGGAGGAAGG CGAACCGCGG AGGACGTCGG CCCTGGAAAG CTTCGCCGTG AACCTCATCG AAAAGGCTGC CCAGGGACGG ATCGATCCAC TCATCGGGCG TGAGGAAGAG ATCCTTAGGA CGCTCCAGAT CCTTGGACGC AGGAGCAAGA ACAACCCGAT CTTCGTCGGA GACCCCGGAG TGGGGAAGAC GGCGATTGCC GAGGGGCTGG CGCTGAAAAT CCAGAAGGGA GAGGTGCCCG AGGTCTTCCA GAACATAGAG ATTTTCGCCT TGGACATGGG AGCGCTTCTT GCGGGCACGA AGTTCCGGGG CGATTTCGAG GCGCGCCTCA AAAGCGTGAT CCAGGAGCTC AAGAAGAAGG AAGGCGCGAT CCTGTTCATC GACGAGATCC ACACGGTGGT GGGGGCTGGT GCGACGAGCG GCGGCTCGAT GGACGCCTCC AATATCCTCA AGCCCGTTCT GGTCACCGGA GGGCTGCGGT GTATCGGGTC CACCACCTAT GAGGAATACA AGAACCACTT TGAGAAAGAC CGTGCGCTGA GTCGCCGGTT CCAGAAGGTC GAAATCCACG AGCCCTCCGT GGAGGAGACC TACCGAATCC TGCTGGGACT GCGGCAATAC TACGAGAAGC ACCATGGGAT CCGGTACACG GACGCCGCAT TGAGGGCGGC GACGGAACTC TCCAACCGGT TCATCAACGA TCGCTATCTG CCGGACAAGG CCATCGACGT CATTGACGAG ACGGGGGCCA GCCTGCGGCT GAAGAAAGAC CGGCGGGTGC GGCGAGTGGT CGGGCCGAAG GACATCGAGC TGGTGGTGGC CAGGATCGCG AAGATTCCTC CCCGGTCGGT CTCCGCCTCC GACCAGTTGC GGCTTCACAG CCTGGACGAG GAGCTCAAGG GCCAGGTGTT TGGCCAGGAC GGGGCCATCG ATGTCCTGGT CAAGGCGATC AAGCGGTCTC GAGCGGGTCT GAGGATTCCG GAGCGGCCCA TCGGGTCTTT CCTTTTCATC GGGCCTACGG GAGTCGGAAA AACCGAAGTC GCCAAGCAAC TGGCACGCAT CCTCGGGGTC AATTTCCTGC GCTTCGATAT GAGCGAATAT ATGGAGAAGC ACACGGTCGC ACGGCTGATC GGCGCGCCTC CGGGGTATAT CGGATTCGAC CAGGGAGGTC TGCTGACCGA CGCCATCCGC AAGCAGCCTT ACACGGTCCT GCTGCTGGAC GAGATCGAGA AGGCCCACCC CGACCTTTTC AGCATTCTCC TGCAGGTGAT GGACCATGCG ACGCTCACGG ACAACAACGG CAAGAAGGCG GATTTTCGCA ACGTCATCCT GCTCATGACC TCAAACGCCG GGGCGCGGGA GATGAGCATG TCGTCCATCG GTTTCGGCGG AGGCACGGTG GAACCCGACC ACCGCGCGAT CAAGGGCCTG AAGGCCGTGG AGAGCCTCTT CAGCCCGGAA TTCCGCAATC GCCTGGACGG GATCGTCCTG TTCAACGGTC TGAACCTCGA GATCATGGAG CAGATTGTCG ACAAGTTCGT CGTCGAGATG GAAACGCAAC TGGGCGAGAA GAAGATCCGC ATGGAATTGA GCGCCGAGGC GAGGCGCTGG CTGGGCGGGC AGGGCTACGA CGTGACGTTC GGAGCACGGC CGCTTGCGCG GTTGATCCAG ACCGAAGTCA AGGATGTGCT GGCTGACGAA ATTCTTTTCG GGAGGCTCAT GCACGGGGGC CGCGTGCAGG TCTTCAGACC TGACGAGGCC GTACCGGCAG GCGAGGAGAT TCTGAAGACG TCCAACCTGG TCTTCGTTTT TCCGGACGTT CCGGGCGTGC CTGCGGCATA G
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Protein sequence | MINRELEITL SAAIKEAKTR RHEFFTLEHV LFAMLHDVTG RRVLFHCGAD LETLKGKLLK FFEERAEKLP EGIDQDPIQT LSVQRVLQRA VMHVHGAEKK EVDAGDILAA MFYEENSYAV YFLKSEGVSR LDVLSYISHG ISKVGYPEED EGARDEPAHE VAPGEEGEPR RTSALESFAV NLIEKAAQGR IDPLIGREEE ILRTLQILGR RSKNNPIFVG DPGVGKTAIA EGLALKIQKG EVPEVFQNIE IFALDMGALL AGTKFRGDFE ARLKSVIQEL KKKEGAILFI DEIHTVVGAG ATSGGSMDAS NILKPVLVTG GLRCIGSTTY EEYKNHFEKD RALSRRFQKV EIHEPSVEET YRILLGLRQY YEKHHGIRYT DAALRAATEL SNRFINDRYL PDKAIDVIDE TGASLRLKKD RRVRRVVGPK DIELVVARIA KIPPRSVSAS DQLRLHSLDE ELKGQVFGQD GAIDVLVKAI KRSRAGLRIP ERPIGSFLFI GPTGVGKTEV AKQLARILGV NFLRFDMSEY MEKHTVARLI GAPPGYIGFD QGGLLTDAIR KQPYTVLLLD EIEKAHPDLF SILLQVMDHA TLTDNNGKKA DFRNVILLMT SNAGAREMSM SSIGFGGGTV EPDHRAIKGL KAVESLFSPE FRNRLDGIVL FNGLNLEIME QIVDKFVVEM ETQLGEKKIR MELSAEARRW LGGQGYDVTF GARPLARLIQ TEVKDVLADE ILFGRLMHGG RVQVFRPDEA VPAGEEILKT SNLVFVFPDV PGVPAA
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