Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_0041 |
Symbol | |
ID | 4460981 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 55576 |
End bp | 56631 |
Gene Length | 1056 bp |
Protein Length | 351 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639700793 |
Product | chorismate synthase |
Protein accession | YP_844179 |
Protein GI | 116747492 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0082] Chorismate synthase |
TIGRFAM ID | [TIGR00033] chorismate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0022126 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.467855 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCAGGGA GCAGCTTCGG CAGGCTTTTT CGTATCACCA CCTGGGGAGA ATCGCACGGC CCCGCACTGG GGGTCGTAAT AGACGGCTGT CCGCCGGGAA TCCCGTTGGC TCCCGAAGAC ATCCAGCGCG ATCTCGAACG GCGCCGTCCC GGCAAGCGCC TCACCTCACC CCGCGGCGAA CCGGACCGGG TGGAGATTCT CTCGGGCGTC TTTCAGGGGG TCACCACAGG CACGCCCATC AGCCTGGTGA TTTTCAACCG GGATGTCCGC AGCGGCGATT ACACGGAATT GGCCGAAGTT TACCGACCCG GGCACGGCGA CCGCACCTAC GAACAAAAAT ACGGCGTCAG GGACTGGCGC GGAGGAGGCC GGAGCTCGGG GCGCGAGACC GCCGCCCGTG TGGCCGCCGG CGCCGTCGCC CGCAAGTTCC TGGCCGGCCG TGGCGTTGAA GTGAAAGCCT ACACGGTTGC CTTCGCCGGC TTGCATGTGG ACTCCTTCAA CCGGGACGAA ATCGATCGCA ATCCCTTTTT CTGCCCGGAT GCGACAGCCG CAGCCGCCAT GGAGCGTCGC GTCGAGGAAC TGCGGGATGC GGGGGACTCC TGCGGAGGCG TCGTCGAAGT GTCGGCAAGA GGCTGTCCGG CGGGCCTCGG AGAGCCTGTC TTCGACAAAT TGGACGCGCG CCTGGCCGGG GCGCTCATGT CCGTGGGAGC AGTGAAAGGA GTGGAGATCG GCGCCGGTTT TGCCGCCGCC GCCATGCTCG GCAGCGAGAA CAACGACCCC CTTACCCCCG ATGGCTATGC AAGCAACAAT GCCGGCGGCG TTCTGGCGGG AATTTCCACC GGGATGGACA TCGTCGCGAG GGCGGCCGTC AAACCCATAC CCTCCATCTC AAAACCGCAA CAGACCGTCA ACACCAGGGG TGAACCCGTC ACCCTCTCCA TCAAAGGACG ACACGACGTA TCGGCCATCC CGCGCATCGT CCCGGTGTGC GAAGCCATGG TTCTCCTGGT GCTGGCCGAC TTCATGCTTC ACCCGGCGCC CGTGGAAAAG CGGTGA
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Protein sequence | MAGSSFGRLF RITTWGESHG PALGVVIDGC PPGIPLAPED IQRDLERRRP GKRLTSPRGE PDRVEILSGV FQGVTTGTPI SLVIFNRDVR SGDYTELAEV YRPGHGDRTY EQKYGVRDWR GGGRSSGRET AARVAAGAVA RKFLAGRGVE VKAYTVAFAG LHVDSFNRDE IDRNPFFCPD ATAAAAMERR VEELRDAGDS CGGVVEVSAR GCPAGLGEPV FDKLDARLAG ALMSVGAVKG VEIGAGFAAA AMLGSENNDP LTPDGYASNN AGGVLAGIST GMDIVARAAV KPIPSISKPQ QTVNTRGEPV TLSIKGRHDV SAIPRIVPVC EAMVLLVLAD FMLHPAPVEK R
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