| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0036 |
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| Symbol | |
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| ID | 4460976 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 49647 |
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| End bp | 52061 |
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| Gene Length | 2415 bp |
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| Protein Length | 804 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639700788 |
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| Product | formate dehydrogenase, alpha subunit |
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| Protein accession | YP_844174 |
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| Protein GI | 116747487 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR01553] formate dehydrogenase, alpha subunit, proteobacterial-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0129417 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.222699 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAATC ATTACATCGA TATCAAGAAT GCCGACGTTA TTTTGATCAT GGGCAGCAAC
GCCGCGGAGA TGCATCCGAT TTCCTTCAAG TGGGTGCTGC GGGCCAGGGA GGAGAGAGGA
GCCAAGATCA TCCACGTGGA TCCCCGTTTC ACCAGGACTT CAGCCCTGGC GGATCATTAC
ATCGCCCTGA GGTCGGGTAC CGACATCGCT TTTCTCGGCG GGATGATCAA GTACATTCTC
GAGAACAAGA AGTATTTCGA AGAGTACGTA AGGGATTACA CCAACGCCTC CTTCATCGTG
GACGAGAAGT TCAGTTTCAA CGACGGTCTG TTCTCGGGGT ACGACCCTGC CGCGAGAAAG
TACGACAAGT CGACGTGGGC CATCAAGGTG GATGAGAAGG GCATTCCGCA AAAGGATCCG
ACCTTTGAGA ACCCGCGGTG CGTGCTGCAG ATGCTGAAGG CTCATTACTC CCGGTACGAC
ATTGACAAGG TTTCCTCGAT CACCGGCACG CCGGTGGAAG ATCTCAAGAC GGTTTATGAA
CTGTACGCCT CGACGGGAGT CAAGGACAAA GCCGGAACGG AGCTCTACGC CCTCGGCTGG
ACGCAGCACA CCGTCGGCGT TCAGAACATC AGGGCCATGT CGATCATTCA GGGCCTGCTG
GGCAACATGG GTATCGCCGG AGGCGGGATC AACGCGCTGC GCGGCGAGCC GAACGTCCAG
GGATCGACCG ACCATGCGAT CCTTTCACAC ATTCTTCCGG GCTATTTGAA GGCGCCTGTG
GCCTCTCTGA CCACCCTGGA GGAGTATTTG AAGAAGAACA CGCCGAAGAC CAGCGAACCT
CAATCGGCGA ACTGGTACCA GAACACGCCC AAGTACATGG TGAGCCTCTT GAAGGCCTGG
TACGGAGACA AGGCCGTCAA GGAAAACGAT TTCGGTTATG CCAACGTACC CAAGCTCGAT
GATGGGCAGG ACGCGACGGT TCTGAACATG ATCGACAAGA TGTATGAGGG CAAGATCAAG
GGATTCACGT GTATCGGCCA GGATCCGGCC GTCAGCCTGC CCAATGCGAA CAAGGTGAGG
CAGGCCTTTA CGAAGCTGGA CTGGATGGTG CATGTGAACA TCTTCGACAA CGAGACCGCG
TCATTCTGGA AAGGCCCGGG CCTGGATCCG AAGAAGGTCA AGACCGAGGT CTTCCTGCTT
CCGGCGGCGG CATCCATGGA GAAAGAAGGC AGCATGAGCA ACAGCGGGCG CATGCTGCAG
TGGAAATACA CGGCCGAGAA GCCCCCGGGA GACGCACTGT CGGTAGGGGA CATCCTCTAT
CGACTGGTGA ACAAGTTGAA GGATCTCTAC AAGAAAGAGA AGGGCGCATT CCCTGACCCG
ATCGTCAACC TGGTGTGGAA TTATGGAGAT GCCAAGGGCC ACTACGACGC CTTGGCGACT
TCCAAGGCGG TGAACGGGCT TTTCCTGGAG GATGTGACCA TCGGCGACAA GACGTTCAAG
AAGGGGCAGT GCGTTCCCGG TTTCGGCAAT CTGCAGGCCG ACGGGAAGAC TTCCTGCGGC
AACTGGATCT ATTCCGGAGC GTTCGCCGCG GACGGGACCA ACCTTATGGC CCGCAGGAAG
AAGGACGACC CGACGGGCCT CGGCCTGTAC CCTGAATGGG GCTGGGCCTG GCCGGTCAAT
CGCCGGATCC TTTACAACCG GGCTTCGGTG GATAAGAACG GGCAACCCTT CGATCCCAGC
CGTCCCCTTC TAAAGTGGGT GGACGGGAAA TGGGTGGGTG ATGTTCCGGA CGGCCCCTGG
CCGCCTCTGA GCGACAAAGA AAAGGGAAAG CTGCCGTTCA TTATGAAGCC GGACGGCGTG
GCCTCCCTCT TCGGGCCGGG GCTGGCGGAC GGACCCTTCC CCGAGCACTA TGAGCCGCTC
GAGGGGCCGC TGGCCAAGAA CCCGATGTCT TCGCAACTGA ACAATCCGGC CATCAAAATA
TTTACAAAGG AGTGCGACCT GTACTCGGGG TGCGATCCCA AGTTTCCTTT CGTCTGCACC
ACATATTCCT GCACGGAACA CTGGTGCACC GGCGCCGAGA CCAGATGGCA GTCATGGCTC
ACGGAAGCCC AGCCGGAGGC CTATGTCGAA ATCAGCAGAG AGCTTGCCGA GCTCCGCGGC
ATCAAGAACG GGGAGAGGGT CCGGGTGGAG TCTCCACGCG GCAAGGTGGA ATGCGTGGCC
ATGGTGACCA CGCGGTTCCG TCCCTTCCAG GTCGGCGGGC AGACGATCCA CCAGGTGGGG
ATGACCTTCA ACTACGGCTG GCTTTTCCCC AAGGATTGCG GTGATACCGC CAACCTGCTG
ACCCCCACCG CCGGTGATGC GAACACCATG ACCCCGGAAT ATAAAGCCTT CATGGTCAAC
GTGACGAAGG TGTAG
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| Protein sequence | MTNHYIDIKN ADVILIMGSN AAEMHPISFK WVLRAREERG AKIIHVDPRF TRTSALADHY
IALRSGTDIA FLGGMIKYIL ENKKYFEEYV RDYTNASFIV DEKFSFNDGL FSGYDPAARK
YDKSTWAIKV DEKGIPQKDP TFENPRCVLQ MLKAHYSRYD IDKVSSITGT PVEDLKTVYE
LYASTGVKDK AGTELYALGW TQHTVGVQNI RAMSIIQGLL GNMGIAGGGI NALRGEPNVQ
GSTDHAILSH ILPGYLKAPV ASLTTLEEYL KKNTPKTSEP QSANWYQNTP KYMVSLLKAW
YGDKAVKEND FGYANVPKLD DGQDATVLNM IDKMYEGKIK GFTCIGQDPA VSLPNANKVR
QAFTKLDWMV HVNIFDNETA SFWKGPGLDP KKVKTEVFLL PAAASMEKEG SMSNSGRMLQ
WKYTAEKPPG DALSVGDILY RLVNKLKDLY KKEKGAFPDP IVNLVWNYGD AKGHYDALAT
SKAVNGLFLE DVTIGDKTFK KGQCVPGFGN LQADGKTSCG NWIYSGAFAA DGTNLMARRK
KDDPTGLGLY PEWGWAWPVN RRILYNRASV DKNGQPFDPS RPLLKWVDGK WVGDVPDGPW
PPLSDKEKGK LPFIMKPDGV ASLFGPGLAD GPFPEHYEPL EGPLAKNPMS SQLNNPAIKI
FTKECDLYSG CDPKFPFVCT TYSCTEHWCT GAETRWQSWL TEAQPEAYVE ISRELAELRG
IKNGERVRVE SPRGKVECVA MVTTRFRPFQ VGGQTIHQVG MTFNYGWLFP KDCGDTANLL
TPTAGDANTM TPEYKAFMVN VTKV
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