Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_R0132 |
Symbol | |
ID | 4281090 |
Type | rRNA |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 4799459 |
End bp | 4802374 |
Gene Length | 2916 bp |
Protein Length | |
Translation table | |
GC content | 51% |
IMG OID | 640717783 |
Product | 23S ribosomal RNA |
Protein accession | |
Protein GI | |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTATGGTT AAGTGACCAA GCGTATACGG TGGATGCCTT GGCAGTCAGA GGCGATGAAG GACGTAATAA CTTGCGAAAA GCGTTGGCGA GCTAGTAATA AGCATTTGAG CTAACGATAT CCGAATGGGG AAACCCACAT GCATAAGCAT GTATCACAAC ATGAATACAT AGTGTTGTGA GGCAAACCCG GGGAACTGAA ACATCTAAGT ACCCGGAGGA AAAGAAATCA ACCGAGATTC CCCTAGTAGC GGCGAGCGAA CGGGGATTAG CCCTTAAGTC TATGGGGTGT TAGTGGAATG TGTTGGAAAG CACAGCGGCA CAGGGTGATA GCCCCGTACA TGAAAACTAA CCATAGATGA AAACGAGTAA GGCGGGACAC GTGACATCCT GTTTGAATAT GGGGGGACCA TCCTCCAAGG CTAAATACTC CTGACTGACC GATAGTGAAC CAGTACCGTG AGGGAAAGGC GAAAAGAACC CCTGTGAGGG GAGTGAAATA GAACCTGAAA CCGTATACGT ACAAGCAGTG GGAGCGGTTC TTGAGACCGT GACTGCGTAC CTTTTGTATA ATGGGTCAGC GACTTACATT TTGTAGCGAG GTTAAGCGAA TAGCGGAGCC GTAGGGAAAC CGAGTGTTAA CTGCGCGTTT AGTTGCAAGG TGTAGACCCG AAACCGAGTG ATCTAGCCAT GGGCAGGTTG AAGGTTGAGT AACATCAACT GGAGGACCGA ACCGACTTAT GTTGAAAAAT GAGCGGATGA CTTGTGGCTG GGGGTGAAAG GCCAATCAAA CTCGGAGATA TCTGGTTCTC CTCGAAAGCT ATTTAGGTAG CGCCTCGAGC GAATACCATT GGGGGTAGAG CACTGTTAAG GCTAGGGGGT CATCCCGACT TACCAACCCT TTGCAAACTC CGAATACCAA TGAGTACTAC TCGGGAGACA GACAGCGGGT GCTAACGTCC GTTGTCAAAA GGGAAACAAC CCAGACCGTC AGCTAAGGTC CCAAAGTGTA TGTTAAGTGG GAAACGATGT GGGAAGGCTT AGACAGCTAG GATGTTGGCT TAGAAGCAGC CATCATTTAA AGAAAGCGTA ATAGCTCACT AGTCGAGTCG GCCTGCGCGG AAGATTTAAC GGGGCTAAAC ATACCACCGA AGCTACGGGT GCATTTCATT AGAAGTGCGC GGTAGAGGAG CGTTCTGTAA GCGGTTGAAG GTGAAGGGGT AACCCACACT GGACGTATCA GAAGTGCGAA TGCTGACATG AGTAACGATA AAGGGAGTGA AAAACTCCCT CGCCGGAAGA CCAAGGGTTC CTGTCCAACG TTAATCGGGG CAGGGTGAGT CGACCCCTAA GGTGAGGCCG AAAGGCGTAA TCGATGGGAA ACAGATTAAT ATTTCTGTAC TTCCGCTAAC TGCGATGGAG AGACGGAGAA GGCTAGGCTA GCGCGGCGTT GGTAGTCCGC GTTTAAGGTG GTAGGTTGAT TTCTTAGGCA AATCCGGGAA ATCGTACTTT AATGTACAGG CTGAGAGCTG ATGACGAGTC ACTACGGTGA TGAAGTAGTT GATGCCATGC TTCCAGGAAA ATCTTCTAAG CTTCAGGTTA GTGGGAATCG TACCCCAAAC CGACACAGGT GGTCGGGTAG AGAATACCAA GGCGCTTGAG AGAACTCGGC TGAAGGAACT AGGCAAAATG GTACCGTAAC TTCGGGAGAA GGTACGCTGC TGTTGGTGAT GGGACTTGCT CCCTAAGCTG ACGGCAGTCG CAGATACCAG GTGGCTGCAA CTGTTTATCA AAAACACAGC ACTGTGCAAA ATCGCAAGAT GACGTATACG GTGTGACGCC TGCCCGGTGC CGGAAGGTTA ATTGATTGGG TTATCTTCGG AGAAGCTCAT GATCGAAGCC CCGGTAAACG GCGGCCGTAA CTATAACGGT CCTAAGGTAG CGAAATTCCT TGTCGGGTAA GTTCCGACCT GCACGAATGG CGTAATGATG GCCACGCTGT CTCCAGCCGA GACTCAGTGA AGTTGAAATT GCGGTGAAGA TGCCGTATAC CCGCGGCTAG ACGGAAAGAC CCCGTGAACC TTTACTATAG CTTGGCACTG AACATTGAAC CTACATGTGT AGGATAGGTG GGAGACTTTG AAGCTTGGAC GCTAGTCTGA GTGGAGTCAA TCTTGAAATA CCACCCTTGT AGTTTTGATG TTCTAACTCT GGCCCCTTAT CGGGGTTGAG GACAGTGCCT GGTGGGTAGT TTGACTGGGG CGGTCTCCTC CCAAAGAGTA ACGGAGGAGC ACGAAGGTTG GCTAAGTACG GTCGGACATC GTACGGTTAG TGCAATGGCA TAAGCCAGCT TAACTGCGAG ACATACACGT CGAGCAGGTA CGAAAGTAGG TCATAGTGAT CCGGTGGTTC TGAATGGAAG GGCCATCGCT CAACGGATAA AAGGTACTCC GGGGATAACA GGCTGATACC GCCCAAGAGT TCATATCGAC GGCGGTGTTT GGCACCTCGA TGTCGGCTCA TCACATCCTG GGGCTGAAGT CGGTCCCAAG GGTATGGCTG TTCGCCATTT AAAGTGGTAC GCGAGCTGGG TTCAGAACGT CGTGAGACAG TTCGGTCCCT ATCTGCCGTG GGCGTTGGAT GATTGAAGGG AGCTGCTCCT AGTACGAGAG GACCGGAGTG GACGAACCGC TGGTGTTCGG GTTGTCATGC CAATGGCATT GCCCGGTAGC TACGTTCGGA ATCGATAACC GCTGAAAGCA TCTAAGCGGG AAGCGAGCCC TAAGATGAGT CATCCCTAGA GCTTTAAGCT CTCTAAAGGG CCGTAGGAGA CTACTACGTT GATAGGCAAG GTGTGTAAGC GTTGTGAGGC GTTGAGCTAA CTTGTACTAA TGACCCGTGA GGCTTAACCA TACAAC
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Protein sequence | |
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