| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_4022 |
|---|
| Symbol | |
|---|
| ID | 4280913 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella frigidimarina NCIMB 400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008345 |
|---|
| Strand | + |
|---|
| Start bp | 4794371 |
|---|
| End bp | 4795504 |
|---|
| Gene Length | 1134 bp |
|---|
| Protein Length | 377 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 638136843 |
|---|
| Product | peptidase M23B |
|---|
| Protein accession | YP_752686 |
|---|
| Protein GI | 114565172 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG4942] Membrane-bound metallopeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATAACTC GTTTATTTAT TAAAGCCAGC ATTGTTGCTG GCTTTCTAAT CTTTTCATTT
ACGGCAAATA GTGCTGATTT GTCTTCACGC CAGTCGGCTT TGAAGTCTAT TCAAGCACAA
ATAAACCAAC AACAAAATTC GCTCAAAGAC ACCTCAAGGC AACGCGAGAA GCTTATTGCG
TTATTAAAAA GTGACGAGCA AGCGATTGCA AAAGCAGCTA AAAAAGTCAA CCAATCACAA
AATTCGTTGG CTGAAGTTAA CGTCAAAATT AACGCTTTAG ATAAACAGCA GATTGATTTA
GCCAAGCTAA AAACAAGTCA GCAAGACACC TTATCAAAGC AGTTATCTAG CGCTTATTTA
GCGGGTAATC ATGACTACAC TAAGATGATG CTTAACCAGC AAAACCCCGC CACTGTTGAG
CGCATGCTGG CGTATTATCA ATTTCTCAAC AATGCCCGCA TAAAAGCTAT TCAACAACTC
AAGCAAACTA GCATTGATCT TAATAAAGTT AAGCAACAGC AAGTGACTGC ACAGCAAAAA
CTCAATGCTT TAGTGATAGA TCAAAAGCAA CAAGCGCTGC AATTAACCAA AGAGCAAGGC
CAACGCCAAC AAACATTGAC TCAACTACAA AGAACCTTAT CTAGCAAAGG GGCAGAATTA
GAGCAGCTGC AAATAGAAGA GGCAAGTTTA AAACGTATAG TGCAACAAGC AATGCTTGCC
GCAAAAGCCA ATCCAACAAT GGATGGATTA GTCAGTCAAA AAGCCAAATT AAAATGGCCA
ACTAACGGCA GAGTGAGTAA ACGATTTGGT AGCAACCGTT CTGGACAAAT TGTTTGGAAA
GGGACAGTGC TTTCCGCACC TGAAGGACAA AATATTAATG CAGTGGCATC AGGAAAAGTT
ATTTATGCCG ACTGGTTACG TGGTTTTGGT ATGGTGTTAG TTATTGATCA CGGCAAGGGT
TATATGAGCC TCTACGGTCA CGCCCAAACA CTATTAAGAC AACCTGGAGA TATGGTGAAA
ACTGGCGAGT CGATTGCGCT TGTTGGTCGT TCTGGGGGAC AAAGTGAACC AGGGCTTTAT
TTCGAAATTC GCAATAAAGG TAAGGCAGTC GATCCAGCCT ATTATTGTCG TTAA
|
|---|
| Protein sequence | MITRLFIKAS IVAGFLIFSF TANSADLSSR QSALKSIQAQ INQQQNSLKD TSRQREKLIA
LLKSDEQAIA KAAKKVNQSQ NSLAEVNVKI NALDKQQIDL AKLKTSQQDT LSKQLSSAYL
AGNHDYTKMM LNQQNPATVE RMLAYYQFLN NARIKAIQQL KQTSIDLNKV KQQQVTAQQK
LNALVIDQKQ QALQLTKEQG QRQQTLTQLQ RTLSSKGAEL EQLQIEEASL KRIVQQAMLA
AKANPTMDGL VSQKAKLKWP TNGRVSKRFG SNRSGQIVWK GTVLSAPEGQ NINAVASGKV
IYADWLRGFG MVLVIDHGKG YMSLYGHAQT LLRQPGDMVK TGESIALVGR SGGQSEPGLY
FEIRNKGKAV DPAYYCR
|
|---|
| |