| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3993 |
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| Symbol | |
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| ID | 4280884 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 4761669 |
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| End bp | 4762253 |
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| Gene Length | 585 bp |
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| Protein Length | 194 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638136814 |
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| Product | transcriptional regulator, TetR family protein |
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| Protein accession | YP_752657 |
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| Protein GI | 114565143 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000102791 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAAAA GTGCAGCGAG TAGACAGTCA ATATGCGTCG TAGGTGAAAA GCTTTTTGCG
TTACACGGTT ATAGCGCAGT AGGTATTAAA TTAATTCTCG ACGAAGTGGG TATTCCTAAA
GGTTCTTTTT ATCATTACTT TGCCAGTAAA GAAGCGTTTG CTGCAACTGT GGCTGAACAT
TATTTCCAGC AGCGCATTCA ACCTATCGCT ATCGATCCAG GCGTGAATTT TAAAGCCAAT
TTGTCTACTG TGCTAAATGG ATATCATCAA CTGATTGATG AGCTGTTTAG TGGCAGTGAA
CCGCGTGGCT GCTTGATGGG TAACTTAATG GTTGAGGTCA GTAGCCTGTC GCCGTTACTG
CATCAAACCT TGAATCAGCT TTATGATCAA TGGATCGCCT TATTGAGTGC ACTTATTCAG
CAAGGGCAAC AACAAGGACA TATTCGTGCG GACTTACCGG CATCAACATT GGCGAGTGTT
TTTTGGTCAA ACTGGCAAGG AACTATGCTA CGCTGCCAAA TTAAAGTCGA TAAAATGGCG
GCTAAACGGG CTTTAGTGCA GTGCATGCAA ATGATGACTC GTTAA
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| Protein sequence | MNKSAASRQS ICVVGEKLFA LHGYSAVGIK LILDEVGIPK GSFYHYFASK EAFAATVAEH
YFQQRIQPIA IDPGVNFKAN LSTVLNGYHQ LIDELFSGSE PRGCLMGNLM VEVSSLSPLL
HQTLNQLYDQ WIALLSALIQ QGQQQGHIRA DLPASTLASV FWSNWQGTML RCQIKVDKMA
AKRALVQCMQ MMTR
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