| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3978 |
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| Symbol | |
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| ID | 4280869 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 4741984 |
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| End bp | 4742718 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638136799 |
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| Product | ABC transporter related |
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| Protein accession | YP_752642 |
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| Protein GI | 114565128 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG4555] ABC-type Na+ transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.73602 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATTACTG TTGCAAACTT AACCAAAAAA ATTGGCGATG TGCAGGCCTT AGATGATTTA
AGCTTTAGCG CTGAGAATGG CCAAATTACC GGTTTACTCG GCCCAAATGG TGCAGGTAAA
ACCACCTGTT TACGCACTTT ATTTGGGTTA CTTAAGCCAG ACTCAGGCAC TGCCACTGTT
GATAACATTG ATGTTGCAGT TGATCCGATT GGGGCCAAAA AGCAATTAGG CTTATTCCCC
GACCCTTTTG GTTTATATGA ACGCTTAAGC CCGCGTGAAT ACATTAGTTT CTTTGCCGAA
CTCAGTGGGA TGTCGCGCAA ACAAGCTAAA AAAGCCACTG CTGATGTGAT TGCACAATTA
AAGCTGGAAG ACATTTGTGA TCGTCGCTGC AAAGGTTTTT CTCAAGGCCA GCGGATGAAA
ACGGCATTAG CACAAGCCAT TGTTCATAAG CCAAGTAACA TCATTTTAGA CGAACCTACT
CGCGGACTTG ATGTCATGAG CACCCGCTTA CTGCGCGACA TTTTATTGCA ACTCAAAGAC
CAAGGTCATT GTGTGCTGTT TTCAAGCCAC GTGATGCAAG AAGTCGCCGC CTTGTGTGAT
CGCGTGATCG TGATGGCTAA TGGCAAAGTG GTCGCCATCG GTAGCCCTGA CGAACTGTGT
CAGCAAACAG GTAAAGACTC TCTAGAAGAT GCATTTATCG AACTTATCGG TACCGACGAA
GGGATTGCAG CATAA
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| Protein sequence | MITVANLTKK IGDVQALDDL SFSAENGQIT GLLGPNGAGK TTCLRTLFGL LKPDSGTATV
DNIDVAVDPI GAKKQLGLFP DPFGLYERLS PREYISFFAE LSGMSRKQAK KATADVIAQL
KLEDICDRRC KGFSQGQRMK TALAQAIVHK PSNIILDEPT RGLDVMSTRL LRDILLQLKD
QGHCVLFSSH VMQEVAALCD RVIVMANGKV VAIGSPDELC QQTGKDSLED AFIELIGTDE
GIAA
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