Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_3975 |
Symbol | |
ID | 4280866 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 4738996 |
End bp | 4739865 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638136796 |
Product | ABC transporter related |
Protein accession | YP_752639 |
Protein GI | 114565125 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGCCG AAGAGAAGCC CGTTTTACGC TTTAATCATG TGAGCAAAAC CTTTGCTGCA AAACACAAAT CTGCAGCAGG TCATGCGGTG TTGGTCGATC TATCGATGAC ACTTTATCCC GGTATGGTGG TCGGGTTATT AGGCCAAAAT GGTGCGGGTA AATCGACGTT AATGCGTTGT GCATTAGGCA TTGTGGGCAT CGAACAAGGC GACATTTCAA CCCTTGGCGA ACCGCCTACC GCTTTATCTG TTCAAGCAAA AGAACGAATT GGTTACGTAC CCCAGCAGCC TTTTGGTTAT GAAGGCTTTA CCATAGATAA AGCGTTAGAA TTGCACCGCA GCTTCTATCC AAACTGGGAT ATGACACTCG AGCAAGATTG GCTTAAACGA TTTGATTTAG ATGTTACGCA AGCGGTGCAA AAATTATCAG TGGGCCAGCG TCAATCATTA GCATTGATAA TGGCCATGGC GTATCGGCCA ACCTTATTAT TACTCGACGA ACCCGTTGCC AGCTTAGATC CCATTGCCAG GCGTCAGTTT ATGAGCGACT TGTTCGATCT CGCGCTCGAT TCAGGTTCTG CAGTGTTATT TTCATCGCAT ATCACCTCAG ATTTAGAACG TGTTGCCAGT CATGTTGCCC TGATTAAAAA AGGCCAACTG ATACTGTTTA AAGAAATCGA CGCCTTGCGT GAAGAGGTTA AATTACTCAA CTTAGCCGAA AACGCTCAGT TACCGTCACA TTATAAAATA TTGAGCCAAA CCGGACAAAG TGTGCTGGTG GATACTCAAG GTAACCTATC GAATATTGCG GGTGTGCAGA GTGAAAAATC ACTCAACCTA GAACAGTTAT TTATGGAGCT GCATCGATGA
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Protein sequence | MEAEEKPVLR FNHVSKTFAA KHKSAAGHAV LVDLSMTLYP GMVVGLLGQN GAGKSTLMRC ALGIVGIEQG DISTLGEPPT ALSVQAKERI GYVPQQPFGY EGFTIDKALE LHRSFYPNWD MTLEQDWLKR FDLDVTQAVQ KLSVGQRQSL ALIMAMAYRP TLLLLDEPVA SLDPIARRQF MSDLFDLALD SGSAVLFSSH ITSDLERVAS HVALIKKGQL ILFKEIDALR EEVKLLNLAE NAQLPSHYKI LSQTGQSVLV DTQGNLSNIA GVQSEKSLNL EQLFMELHR
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