Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_3966 |
Symbol | |
ID | 4280857 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 4730835 |
End bp | 4731515 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638136787 |
Product | 2,3-diketo-5-methylthio-1-phosphopentane phosphatase |
Protein accession | YP_752630 |
Protein GI | 114565116 |
COG category | [C] Energy production and conversion |
COG ID | [COG4229] Predicted enolase-phosphatase |
TIGRFAM ID | [TIGR01691] 2,3-diketo-5-methylthio-1-phosphopentane phosphatase |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTATTA GAGCTATTAT CGTTGATACC GCCGGTACCA CTACCGATCT TAACTTTATT CAGGATGTGT TATTTCCTTA CTCAAGAAAA GCGATGGCTG AATTTCTTGA GCAAAACCAG CATAACGTTG TGGTTGATTA CTGCATCAGC GATGTTAAAG ATATTGCCTT AGAACCAGAT GCGACACTCG AACGAGTCAC TGAGATTTTA CAGCAATGGA TCGATGAAGA CCGTAAACTA ACACCACTTA AAACCCTACA AGGATTAATC TGGAAACAAG GTTATAACCG CGTAGAGTTT ACTGGCCACA TTTACCCTGA CTTTATCGAT AGCATTGAGC GCATTAAAGA AAAAGGCATT CGTATTTACA GCTTCTCTTC TGGGTCTGTC GAAGCGCAAA AGCTGTTATT TAGCCACACC GAAGCAGGCG ATTTAACCGG TTCGTTCAAT GGTCACTTTG ATACCCGCAC GGGCAATAAG TTAGACAAAC AAGCCTACTG CAATATTTGC AACACCATTA GCTTGAAACC AAAGCAGATT TTATTTGTGT CAGATGTCGC AGAAGAGCTC AAAGCTGCTG AAGCCGCCGG CATGACAACT TGCCAAATGA TCCGCTTTGC TGACCAACGC CAAGCTAAGT GCAAAAAAAT AAGCAGCTTT AGTGAGTTAG TGTTCGATTA A
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Protein sequence | MSIRAIIVDT AGTTTDLNFI QDVLFPYSRK AMAEFLEQNQ HNVVVDYCIS DVKDIALEPD ATLERVTEIL QQWIDEDRKL TPLKTLQGLI WKQGYNRVEF TGHIYPDFID SIERIKEKGI RIYSFSSGSV EAQKLLFSHT EAGDLTGSFN GHFDTRTGNK LDKQAYCNIC NTISLKPKQI LFVSDVAEEL KAAEAAGMTT CQMIRFADQR QAKCKKISSF SELVFD
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