| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3960 |
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| Symbol | |
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| ID | 4280851 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 4724855 |
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| End bp | 4725682 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638136781 |
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| Product | integrase catalytic subunit |
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| Protein accession | YP_752624 |
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| Protein GI | 114565110 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2801] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGTAAAGC CGTCGCGGCG GCGGGAGCTG GCGCAAAAGG CGGTGCAAGA TAAAGCCATT
TCGATCGCAT TTGCGTGTGC CTTGTTTGGA CTCAGTGAGA GCTGTTATCG CTATCAGGCA
AAACTCAGTG ATGAAAACGC TGCAATAGCC GACTGGTTAC AGCAACTGAC ATCAACCCAT
CGGAGTTGGG GGGTTGGGCT ATGTTATTAC TTTTTACGTA ACGTGAAACG CTACCGATGG
AACCATAAGC GGGTGTATAG GATTTACCGA GAATTGGAGC TAAATCTACG AATTAAGCCG
AAGAAACGCT TGAAGCGTGA TAAACCGGAC GCATTGGCGG TGCCAGAGGC AATCAATGAA
TGTTGGTCCA TGGACTTTAT GCACGACCAA CTGGAAGATG GTCGCAGCAT TAGGTTATTG
AACGTAATTG ATGATTACAA CCGTGAAGGC TTGGCGATAG AGGTCGACTT CTCCTTACCT
GCGGAGCGTG TGGTGAGAAC ATTGGATCAA ATCATCGAAT GGCGTGGAAA ACCAAAACAG
ATACGCAGTG ATAATGGTCC AGAGTATATA AGTGCGGTAC TGGCTGCCTG GGCTGAAAAA
CACAATGTAG AACTGAAATT TATTCAGCCT GGCAATCCAC AGCAGAATGC CTATGTAGAA
CGCTATAATC GGACTGTGCG ATACGAATGG CTGAGCCAAT ATCTTTGGAA TAGTATTGCC
GAGGTACAGG AACATGCGAC ACAATGGCTA TGGTTTTATA ACAATGAAAG ACCCAATACA
GCAATTGGTG GTGTCCCACC AAAGCAAAAA CTGGCACTAG TGGCCTAA
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| Protein sequence | MVKPSRRREL AQKAVQDKAI SIAFACALFG LSESCYRYQA KLSDENAAIA DWLQQLTSTH
RSWGVGLCYY FLRNVKRYRW NHKRVYRIYR ELELNLRIKP KKRLKRDKPD ALAVPEAINE
CWSMDFMHDQ LEDGRSIRLL NVIDDYNREG LAIEVDFSLP AERVVRTLDQ IIEWRGKPKQ
IRSDNGPEYI SAVLAAWAEK HNVELKFIQP GNPQQNAYVE RYNRTVRYEW LSQYLWNSIA
EVQEHATQWL WFYNNERPNT AIGGVPPKQK LALVA
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