| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3953 |
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| Symbol | |
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| ID | 4280844 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 4716799 |
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| End bp | 4718469 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638136774 |
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| Product | urocanate hydratase |
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| Protein accession | YP_752617 |
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| Protein GI | 114565103 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2987] Urocanate hydratase |
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| TIGRFAM ID | [TIGR01228] urocanate hydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAAAC GACACGATCC AAGCCGTCGC ATTATTGCGC CGCACGGTAC TCAATTACAG
TGTAAAAGTT GGCTAACCGA AGCCGCGATG CGCATGTTAA TGAACAACTT ACACCCTGAT
GTTGCCGAAC GCCCAGAAGA TTTAGTGGTG TACGGCGGCA TTGGCCGCGC CGCGCGCGAC
TGGCAAAGCT ACGACAAAAT TATTGAGGTG CTTAAACGCC TTGAAGACGA TCAAACCTTA
TTGGTGCAGT CTGGTAAACC TGTTGGGGTG TTTACCACTC ATAGCAATGC GCCACGGGTC
ATTATTGCTA ATTCAAACCT AGTGCCACAT TGGGCTAACT GGGAACACTT TAACGAACTG
GATAAGAAAG GTTTGGCCAT GTATGGCCAA ATGACTGCGG GTTCGTGGAT TTATATTGGT
TCGCAAGGCA TTGTGCAAGG TACTTACGAA ACGTTTGTCG CCATGGCTAA ACAGCACTTT
AATGGCTCGT CAGCGGGTAA GTGGATTTTA ACCGGCGGTT TAGGCGGCAT GGGTGGCGCA
CAACCACTGG CTGGTACTAT GGCGGGTTAT TCGGTATTAA CCTGTGAAGT AGATGAAACC
CGTATCGATT TTCGCATGCG TACTGGTTAC GTCGACAAAA AAGCCACTTC ATTAGATCAA
GCATTAGCGA TGATTTACGC AGCAAACCAA AGTGGCAAGC CTGTTTCAGT CGGCTTATTA
GCCAATGCTG CCGATGTGTT TACTGAGCTA GTGACCCGCG GCATTGTGCC TGATGTGGTA
ACCGATCAAA CCTCCGCACA CGACCCATTA AACGGCTATT TACCTCAAGG CTGGAGCTTA
GAATACGCTG CTAAAATGCG TAAAACTGAC GAAGCGGCAG TTGTTAAAGC GGCGAAGCAA
TCAATGGCGG TGCAAGTTAG AGCAATGTTG GCATTGCAGG CAGCCGGTGC AGCAACCACA
GATTATGGTA ACAATATTCG CCAAATGGCC TTTGAAGAAG GCGTAACGAA TGCGTTCGAT
TTCCCTGGGT TTGTACCAGC ATATGTACGG CCGTTATTTT GTGAAGGTAT TGGACCATTC
CGTTGGGTAG CCTTGTCTGG CGATCCGGAA GATATCTACA AAACAGATGC CAAAGTCAAA
GAGCTGATTC CAGATAATCC GCAGTTACAC AATTGGTTAG ACATGGCGCG TGAGCGTATT
GCGTTTCAAG GTTTACCTGC ACGCATTTGC TGGGTCGGAC TTAAAGACCG TGCCCGCTTA
GCGTTAGCCT TTAATGAAAT GGTCAAAAAC GGTGAGTTAT CGGCACCGAT TGTTATTGGC
CGTGATCACT TAGATTCTGG CTCAGTTGCC AGCCCAAATC GTGAAACCGA GGCCATGTTA
GACGGCTCTG ATGCGGTGTC AGATTGGCCA TTAATGAATG CCTTACTCAA TACGGCTAGT
GGTGCAACTT GGGTGTCATT GCATCATGGT GGCGGCGTTG GTATGGGCTT TAGTCAACAT
TCTGGGGTGG TGATAGTGGC CGACGGAACC GATGAAGCTG CGGTACGTTT AGGCAGAGTA
TTGTGGAACG ACCCTGCTAC TGGGGTAATG CGTCATGCAG ATGCTGGCTA TGACATTGCA
AAAAATTGTG CCAAAGAGCA AGGCTTAGAC CTGCCAATGT TAGGAGCTTA A
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| Protein sequence | MDKRHDPSRR IIAPHGTQLQ CKSWLTEAAM RMLMNNLHPD VAERPEDLVV YGGIGRAARD
WQSYDKIIEV LKRLEDDQTL LVQSGKPVGV FTTHSNAPRV IIANSNLVPH WANWEHFNEL
DKKGLAMYGQ MTAGSWIYIG SQGIVQGTYE TFVAMAKQHF NGSSAGKWIL TGGLGGMGGA
QPLAGTMAGY SVLTCEVDET RIDFRMRTGY VDKKATSLDQ ALAMIYAANQ SGKPVSVGLL
ANAADVFTEL VTRGIVPDVV TDQTSAHDPL NGYLPQGWSL EYAAKMRKTD EAAVVKAAKQ
SMAVQVRAML ALQAAGAATT DYGNNIRQMA FEEGVTNAFD FPGFVPAYVR PLFCEGIGPF
RWVALSGDPE DIYKTDAKVK ELIPDNPQLH NWLDMARERI AFQGLPARIC WVGLKDRARL
ALAFNEMVKN GELSAPIVIG RDHLDSGSVA SPNRETEAML DGSDAVSDWP LMNALLNTAS
GATWVSLHHG GGVGMGFSQH SGVVIVADGT DEAAVRLGRV LWNDPATGVM RHADAGYDIA
KNCAKEQGLD LPMLGA
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