Gene Sfri_3945 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_3945 
Symbol 
ID4280836 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand+ 
Start bp4707835 
End bp4708458 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content44% 
IMG OID638136766 
Productcytochrome c, class I 
Protein accessionYP_752609 
Protein GI114565095 
COG category[C] Energy production and conversion 
COG ID[COG2863] Cytochrome c553 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.405176 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGT TAGCTCTTGC GCTGTCTGTA GTCGCCGCTA TGTCATCACC AGTTATGGCT 
GAAGGTAATG CTGAAGTAGG CAAAACTAAA GCAATCGTAT GTTCTGCCTG TCACGGTGTT 
GACGGCAATA GCATGATTGA TATGTATCCT AAATTAGCAG GCCAACACCC TGCATATCTT 
GAAAAACAAT TAACAGAATT CCGATTAGCG GCTAAAACCG GTGGTGCTGA AGGTCGTATG 
GACCCAATCA TGATCGGTAT GTCAATGGGT CTAAGCGATG AAGACATTGC TGACATTTCA 
GCATTCTTCG CTAGCCAAGT AAAAGTTGTC GCCGACGTTG CCGATGTACC TGCCGCAGGT 
GAAAAACTGT ACAAAGGCGG TGATGCCGCT CGTGGTATTA CGGCATGTGT TGCATGTCAT 
GGACCTGAAG GTGAGGGCGC AGAAGCTGCT GGTTTCCCTG CTGTTGGTGG TCAACATGCT 
AACTACATCA AAATTCAGCT AACAAAATTC CGTGATGCTA GTCGTCACAA TGATTTAAAC 
GGCATGATGC AAGATGTAGC TAAAAAGTTA TCTGATGCCG ATATCGATGC ATTATCTAAA 
TATATTTCAA GCATTAAGAA CTAA
 
Protein sequence
MKKLALALSV VAAMSSPVMA EGNAEVGKTK AIVCSACHGV DGNSMIDMYP KLAGQHPAYL 
EKQLTEFRLA AKTGGAEGRM DPIMIGMSMG LSDEDIADIS AFFASQVKVV ADVADVPAAG 
EKLYKGGDAA RGITACVACH GPEGEGAEAA GFPAVGGQHA NYIKIQLTKF RDASRHNDLN 
GMMQDVAKKL SDADIDALSK YISSIKN