Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_3929 |
Symbol | |
ID | 4280820 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 4689438 |
End bp | 4690391 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 638136750 |
Product | ADP-L-glycero-D-manno-heptose-6-epimerase |
Protein accession | YP_752593 |
Protein GI | 114565079 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | [TIGR02197] ADP-L-glycero-D-manno-heptose-6-epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAGTTG TGACAGGCGC AGCCGGGTTT ATTGGTAGTA ATTTAGTAAA ACAACTTAAT GCCATGGGCC GAAATGACAT TATTGCGGTA GACGACTTAA CCGACGGCAC CCAGATGTTC AATTTAGCCG ATTGTGAAAT TGCTGATTAT CTTGATAAAG ATGATTTCAT TAAGCAAATC AAAGCGGGCG ATTTTGATAA CAAACTTGAA GTCATTTTCC ATCAAGGCGC TTGCTCATCG ACCACCGAGT GGGATGGCAA GTTTATGATG GCCAATAACT TCGAGTATTC AAAAACATTA TTGCATTACA GCCAAGCTAA TAACTGCCAA TTTATTTATG CTTCTTCTGC ATCTGTCTAT GGTGGCAGCG AAAAGTTTAT TGAGCAACGT GAACTTGAAA AGCCACTCAA TGTCTACGCT TACTCTAAGT TCTTATTCGA TCAGTATGTA AGACAGCAAA AACTCACTGG TCAAGTGGCA GGATTACGTT ATTTCAACGT CTATGGTCCG CGTGAACAAC ACAAAGGCGG CATGGCCAGT GTGGCTTTCC ACTTTAACAA TCAAATTAAC ACTAATGGCG TGTGTCGTTT GTTTGAAGGT GTTGATGGTT ATGAAAATGG TCAGCAACTT CGTGATTTTG TGTTTGTCGA AGATGTGGTT AAAGTCAATT TATGGCTATG GCAGAATCCA TCTGTATCGG GCATATATAA CTGCGGAACA GGCCAAGCGC AAAGCTTTAA TGATGTTGCC AATGCTGTGA TTGCTTATCA TGGTAAAGGG CACATTGAAT ACATTCCTTT CCCAGACAAA TTGAAAGGCG CTTATCAAAG TTATACCCAA GCAGATTTAA CTCAATTAAG AGCTGCTGGT TATCAAGGTG AGTTTAAAAC GGTTGAGCAA GCAGTACCGG AATATTTAGA TTGGCTTAAA ACCCAACATT TTATTGGCCA ATAA
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Protein sequence | MIVVTGAAGF IGSNLVKQLN AMGRNDIIAV DDLTDGTQMF NLADCEIADY LDKDDFIKQI KAGDFDNKLE VIFHQGACSS TTEWDGKFMM ANNFEYSKTL LHYSQANNCQ FIYASSASVY GGSEKFIEQR ELEKPLNVYA YSKFLFDQYV RQQKLTGQVA GLRYFNVYGP REQHKGGMAS VAFHFNNQIN TNGVCRLFEG VDGYENGQQL RDFVFVEDVV KVNLWLWQNP SVSGIYNCGT GQAQSFNDVA NAVIAYHGKG HIEYIPFPDK LKGAYQSYTQ ADLTQLRAAG YQGEFKTVEQ AVPEYLDWLK TQHFIGQ
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