Gene Sfri_3922 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_3922 
Symbol 
ID4280813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand+ 
Start bp4682537 
End bp4683523 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content44% 
IMG OID638136743 
Productmolybdenum cofactor biosynthesis protein A 
Protein accessionYP_752586 
Protein GI114565072 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2896] Molybdenum cofactor biosynthesis enzyme 
TIGRFAM ID[TIGR02666] molybdenum cofactor biosynthesis protein A, bacterial 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.945781 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCAAC TTATCGACAG CTTTCAGCGA AAAGTAGATT ATTTACGCTT ATCGGTAACC 
GATCGTTGCG ATTTTCGCTG TGTATATTGC ATGAGCGAAG ATCCGACTTT TTTACCTAAA 
TCACATGTAC TTAGTTTGGA AGAGTTGTCG TGGATAGCCC AAGCTTTTAC TGAGCTTGGG 
GTAAAAAAAA TACGCCTCAC CGGTGGCGAG CCACTAGTGC GATCCGACTG TGACAAACTG 
GTCAAATTAT TGAGAAAATT ACCTCAACTG GAAGAACTCT CAATGACCAC TAATGGGTCT 
CGATTATCTA AGCTAGCGCA ACCACTGTTT GATAATGGCC TTAGCCGATT GAATATCAGC 
CTTGATACCT TAAACCCCGA TGTGTTTGCG CAGCTAACGC GTAACGGAAA ACTAGAGCGT 
GTCATCGCTG GCATTGATGC CGCAATAGCG GCTGGCTTTC GTAACATCAA AATTAATGCG 
GTCATTCTGC GTGGACGAAA CGATCATGAA GTATTAGATT TAGTTGAGTT CTGCCGCCAA 
CGTCAACTCG ATATTGCTTT TATTGAAGAA ATGCCAATTG GACTCATGGA TGATCGTCAT 
CGTCACCGTC ATTGCTCAAG TGACGAAGTC CGAAACATTA TTGAAACGCG CTATCCCTTA 
ATCGCTTCAT CTAAACGCAC AGGTGGCCCC TCTCGATATG TAAAGATGGC CGACAGCACG 
ATTCGTATCG GATTTATATC GCCACACAGC AATGACTTTT GTCATGAATG TAATCGTGTA 
AGAGTAACCG TTGAAGGGCA ATTACTGTTG TGCTTAGGTA ATGAGAATGC CATTGATTTA 
AAATCAATTG TGCGACAATT CCCCGCCGAC ATTGAACGTC TTAAACAAGC CATTACCGAT 
GGAATGCAAT ACAAGCCGCA ATCTCACCAC TTTAACCTCA ACGCTGCCCC ACAAATACTA 
CGCTTTATGA ATGCCACTGG CGGCTAA
 
Protein sequence
MSQLIDSFQR KVDYLRLSVT DRCDFRCVYC MSEDPTFLPK SHVLSLEELS WIAQAFTELG 
VKKIRLTGGE PLVRSDCDKL VKLLRKLPQL EELSMTTNGS RLSKLAQPLF DNGLSRLNIS 
LDTLNPDVFA QLTRNGKLER VIAGIDAAIA AGFRNIKINA VILRGRNDHE VLDLVEFCRQ 
RQLDIAFIEE MPIGLMDDRH RHRHCSSDEV RNIIETRYPL IASSKRTGGP SRYVKMADST 
IRIGFISPHS NDFCHECNRV RVTVEGQLLL CLGNENAIDL KSIVRQFPAD IERLKQAITD 
GMQYKPQSHH FNLNAAPQIL RFMNATGG