| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3855 |
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| Symbol | |
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| ID | 4280746 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 4605045 |
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| End bp | 4605593 |
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| Gene Length | 549 bp |
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| Protein Length | 182 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638136676 |
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| Product | HPP family protein |
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| Protein accession | YP_752519 |
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| Protein GI | 114565005 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3448] CBS-domain-containing membrane protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGATTCT ATTTTACTCG CATGCGATCA AAGGACATTT GTCCTCCTAG GCAACCGCTA
AAGAAAATTG TTTGGTCATG GATTGGCGCA TTTTGTGGTA TTTACTTAGT TGCTGGTTTA
GCGTTTTATA CGGCCGCTAA TCCTATGGGC AGTATGTTTG TAATAGGGTC TTTTGGTGCG
TCAGCTGTGT TGGTTTACGG TGCTCCGTTA GCGGAGTTTT CTCAGCCCCG TAATTTAATT
GGTGGCAGCG TAATATCAGC GTTAATAGGT GTTGCGGTTT ATCAAGTCTT TACTGATTAT
ATAGTGCTAG CCTGCGCTTT GGCTGTATCG CTATCTATTG CGTTAATGTA CTTGACCAGA
ACCCTACATC CGCCCGCTGG TGCTACAGCG TTGATTGCCG TGATTGGTGG GGAAAACGTT
CATCAGCTCG GTTTTCTCTA TGCCTTAATG CCCGTGTTTT TAGGTACGGT ATTACTCTTG
ATCGTTGCGT TGGTAGTGAA TAATCTTTCC ACAGATCCTA AGCGTCACTA TCCTGTTTAT
TGGGTGTAA
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| Protein sequence | MRFYFTRMRS KDICPPRQPL KKIVWSWIGA FCGIYLVAGL AFYTAANPMG SMFVIGSFGA
SAVLVYGAPL AEFSQPRNLI GGSVISALIG VAVYQVFTDY IVLACALAVS LSIALMYLTR
TLHPPAGATA LIAVIGGENV HQLGFLYALM PVFLGTVLLL IVALVVNNLS TDPKRHYPVY
WV
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