Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_3840 |
Symbol | |
ID | 4280731 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 4580743 |
End bp | 4581951 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638136661 |
Product | hypothetical protein |
Protein accession | YP_752504 |
Protein GI | 114564990 |
COG category | [S] Function unknown |
COG ID | [COG3214] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCAATC CCTACTCAGC TAAACAGTGG CTCCAACTCA ATATGCAGCA GCAAGGTTTA TTACAGCCTT TGGCGTCATT GCCAAAGCTT ATCCAGCAAT TAAGTTATGT GCAAATTGAC TCTATTAATG TGGTCGAACG CGCGCATCAT CATGTATTAC ACAGTCGCCT GCCCGAATAT TCTGCCACCA TGTTAGATGA TGCAATGAGC GATAAAACCG TGTTTGAGTA CTGGTCCCAT GCTGCTGCTT ATCTACCTAT TGAAGATTAC CGTTTTAGCC TGTATCGCAA ACAGCAATTA CAACAAGGTG GTAAGCATTG GTTTGAGCCC GAACATAAAG TCATGCGCGA AGTTAAAGCC CGTATTAGCG CCGAAGGTCC ATTAAAAGCC AGTCAGTTCA CCCATGAGTC AGACACTAAA AATGGCACTT GGTGGGATTG GAAACCAGCT AAAAAAGCAC TTGAGCAGTT GTTTATGCAA GGCGAGTTAA TGGTTGCTAG GCGCGACAAG TTTCAAAAGG TGTACGACTT AACCGAGCGA GTACTCCCAA AGCACATCGA CACCACAGCA CCTAGCGATA CAGAATTTGC CCAACACTTG ATTCAGCGTT ATTTATCGGC GCATGGTTTT GGTAATTTGC AGCAAATACA ATATTTACGC AAAGGCCTCA AACCGCTACT CAGCAAAACA TTAGCGCAAC TGTGCGAACA AGGTGATATC GCCAGCTTTA CCGACTCCAG CGCCAATACA CAACACGTTT ACTTCTACCA ACCTACGCTC ACCTTACCCA CTGCTATTCC CAATAAAGTC TGGCTACTTA ATCCGTTTGA TAATTTAGTC ATTCAACGCC AAAAGCTTAG GCAATGGTTT GGGTTTGATT ACCAGATAGA AGTGTATGTG CCTGAGGCTA AACGCCAATT TGGTTACTAT TCACTGCCCA TTCTATGGCG TGACGGTTTT GTTGGCCGCG TGGATGTAAA AGCCGACCGA AAAAACCACT GTTTGTTACT GCAAAACCTG CACATTGAAA TGCAGACATT GACCAACCAA CATGATGAAT TAAATGATAA GGCGCATTTT GTTTCTGCGT TAATCGAGGC CATTAATCAC TACTGCACAT TCAACAACTG CCAGCGTTGG CAGCTAATAC AATGTAACGA TAAAACGATT GCAAAAATGT TACTCAAAGC AATTCAACAG AGTAGTTAA
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Protein sequence | MTNPYSAKQW LQLNMQQQGL LQPLASLPKL IQQLSYVQID SINVVERAHH HVLHSRLPEY SATMLDDAMS DKTVFEYWSH AAAYLPIEDY RFSLYRKQQL QQGGKHWFEP EHKVMREVKA RISAEGPLKA SQFTHESDTK NGTWWDWKPA KKALEQLFMQ GELMVARRDK FQKVYDLTER VLPKHIDTTA PSDTEFAQHL IQRYLSAHGF GNLQQIQYLR KGLKPLLSKT LAQLCEQGDI ASFTDSSANT QHVYFYQPTL TLPTAIPNKV WLLNPFDNLV IQRQKLRQWF GFDYQIEVYV PEAKRQFGYY SLPILWRDGF VGRVDVKADR KNHCLLLQNL HIEMQTLTNQ HDELNDKAHF VSALIEAINH YCTFNNCQRW QLIQCNDKTI AKMLLKAIQQ SS
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