Gene Sfri_3835 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_3835 
SymbolpyrE 
ID4280726 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand- 
Start bp4574174 
End bp4574815 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content44% 
IMG OID638136656 
Productorotate phosphoribosyltransferase 
Protein accessionYP_752499 
Protein GI114564985 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0461] Orotate phosphoribosyltransferase 
TIGRFAM ID[TIGR00336] orotate phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAGCCT ATCAACGCGA ATTTATTGAG TTTGCCTTAG ACCGCCAAGT ATTACGTTTT 
GGTGAGTTTA CCCTTAAATC TGGCCGTACG AGTCCGTACT TTTTTAATGC TGGATTGTTC 
AATACGGGTA AAGACTTAGC GCGTTTAGGT CGCTTTTATG CTGCGGCGTT AATGGACTCG 
GGTATTGAAT TCGATTTGCT ATTTGGCCCA GCGTATAAAG GTATTCCGAT AGCGACAACC 
ACAGCTGTAG CGTTATGCGA TCATCACGAT GTGGATATTC CTTACTGCTT TAATCGTAAA 
GAAGCCAAAA CCCACGGCGA AGGTGGCAGT TTGGTGGGCA GCGAGTTAAA AGGCAAAGTC 
ATGCTGGTGG ACGATGTGAT CACCGCAGGT ACCGCTATTC GTGAATCGAT GGAAATTATT 
AATGCTCACA ATGCCCAACT TGCGGGTGTG TTGATTGCAT TAGATCGTCA AGAAAAAGGT 
AAGGGCGAGT TGTCGGCGAT TCAAGAAGTT GAACGCGATT TTGGTTGTCA GATTGTGTCG 
ATTATTAAGC TTGCTGACTT AATCAGTTAT TTGTCTGAAA AGCCGGGTAT GGAAGCAGAA 
CTTGCTTCAG TTAGCGCGTA TCGTGAGCAA TACGGTATTT AA
 
Protein sequence
MKAYQREFIE FALDRQVLRF GEFTLKSGRT SPYFFNAGLF NTGKDLARLG RFYAAALMDS 
GIEFDLLFGP AYKGIPIATT TAVALCDHHD VDIPYCFNRK EAKTHGEGGS LVGSELKGKV 
MLVDDVITAG TAIRESMEII NAHNAQLAGV LIALDRQEKG KGELSAIQEV ERDFGCQIVS 
IIKLADLISY LSEKPGMEAE LASVSAYREQ YGI