Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_3810 |
Symbol | |
ID | 4280701 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 4543898 |
End bp | 4545646 |
Gene Length | 1749 bp |
Protein Length | 582 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638136631 |
Product | peptidoglycan glycosyltransferase |
Protein accession | YP_752474 |
Protein GI | 114564960 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0768] Cell division protein FtsI/penicillin-binding protein 2 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTAGAC AAGCAAAGCA AAAATTAGGT CACGAACTTA TTCCATGGCG TTTATACGTT GTGGTGGGGT TCGTTTTGTT GTTATTTTGC AGTCTAGTTG CGCGTGCGGC CTATATTCAA ATTATTGAGC CCGATAAACT GCGTCACGAA AGTGATATGC GCACACTGCG CACAACTAGT AATCAAGTTC AGCGAGGCTT AATCACCGAT CGTAATGGCG ATATGCTCGC GGTTAGTGTA CCTGTGCGTG CTGTGTGGGC TGATCCTAAA CATGCCCATG ATCAAGATGC ATTTAAAGAC ATGCGACGTT GGCAAGCCCT TGCAGATGTT CTGCAAGAAC CTGTCGACGA ATTGGTCAGA AAAGTCAAAA ACAATCCTAA AAAGCGCTTT GTATATCTTA AACGTCAAGT GACCTCTGCT GTTGCTGACT ATATTGAGCA GCTTAAAATT GGTGGTATTT ACCTTAAATC AGAATCCCGT CGTTACTATC CTGCTGGTGA AACGGCTGCA CAGTTAATTG GTATCACTAA TATCGATGAT GTGGGCATTG AAGGCATTGA AAATACTTAT AATACTTGGT TAACAGGAAC GCCCTCAAAG CAAAAAGTAC GTAAAGCTCG CGATGGCAGT GTGGTTGAAC GTTTGGATAT CGTGCAAGAA GGCGAAAGTT CTAACGATTT AGTGCTTAGT ATTGATCAAC GTATTCAGCA GTTGGCATAT CGTGAATTGA AACGTGCGAC AGAAGTATAC CAAGCGACGT CTGGGTCTGT GGTGGTTATC GATGTGACCA CGGGCGAAGT ATTAGCGATG GTGAATACTC CTTCATATAA TCCTAATGCC CGAGATAATT TACAGCCACA TCGTATGCGC AACCGCGCCT TAACTGACAC ATTCGAACCA GGGTCTACGA TTAAGCCTTT TGTTGTTGCT GCAGCCCTTG ATGCCGGCAC AGTGAAAGTG AATGAATTAA TATCGACATC ACCAGGGTGG ATGCGGATTG GTGGGCGTCA AGTTCGCGAT TCGAGTAACT ATGGTGATAT GACGTTAGCC AAAATTTTGG TTAAATCGAG TAACGTGGGA ATTAGTAAGT TGTCCTTGTC TATGCCCGTT GAACAATTAC TCGGTACATA CCAATCCATG GGATTAGGCA ATTATACGGG AATTAATTTA ACCGGTGAAA GTGCGGGTTT GATCCATGAC CGTAATCGTT GGTCTGACTT TGAACGTGCC ACCTTGTCTT TTGGTTATGG CCTTACGGCG ACACCGTTAC AAATAGCACG TATGTACGCC ACGTTAGGCA GTGGTGGAAT ACTCTATCCT GTGTCAATTT TAAAACTGAG ACAACCACCT AAAGGCGAGC AAGTCATTTC AAATAAAGTT GCCTATGACG TAATGGAAAT GCTCGTTGGG GTAACTGAAA CGGGAGGCAC AGGAACCAAA GCACACATTG ATGGCTACCC CGTTGCTGGT AAGTCAGGTA CAAGTCGTAA AGCCATTGCC GGTGGTTATG GCGATGATTA CGTTGCTTTA TTTGCTGGTG TAGCTCCCGT TCATAATCCT CGCTTGGCTA TTTCAGTTGT GATTAACGAA CCCAAAGGCG ACAAATATTA CGGTGGTGAT GTTTCCGGCC CTGCTTTTGC CAAAATTATG TCTGGTGCCT TGCAAATGCT TAATGTAGAA CCAATTTCAG AGCAGGAGGC TGTTAATTTG GCCACCGCGC GAGGAGCGCA AAATAATGTT ATTAAATGA
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Protein sequence | MARQAKQKLG HELIPWRLYV VVGFVLLLFC SLVARAAYIQ IIEPDKLRHE SDMRTLRTTS NQVQRGLITD RNGDMLAVSV PVRAVWADPK HAHDQDAFKD MRRWQALADV LQEPVDELVR KVKNNPKKRF VYLKRQVTSA VADYIEQLKI GGIYLKSESR RYYPAGETAA QLIGITNIDD VGIEGIENTY NTWLTGTPSK QKVRKARDGS VVERLDIVQE GESSNDLVLS IDQRIQQLAY RELKRATEVY QATSGSVVVI DVTTGEVLAM VNTPSYNPNA RDNLQPHRMR NRALTDTFEP GSTIKPFVVA AALDAGTVKV NELISTSPGW MRIGGRQVRD SSNYGDMTLA KILVKSSNVG ISKLSLSMPV EQLLGTYQSM GLGNYTGINL TGESAGLIHD RNRWSDFERA TLSFGYGLTA TPLQIARMYA TLGSGGILYP VSILKLRQPP KGEQVISNKV AYDVMEMLVG VTETGGTGTK AHIDGYPVAG KSGTSRKAIA GGYGDDYVAL FAGVAPVHNP RLAISVVINE PKGDKYYGGD VSGPAFAKIM SGALQMLNVE PISEQEAVNL ATARGAQNNV IK
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