Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_3809 |
Symbol | murE |
ID | 4280700 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 4542421 |
End bp | 4543911 |
Gene Length | 1491 bp |
Protein Length | 496 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638136630 |
Product | UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase |
Protein accession | YP_752473 |
Protein GI | 114564959 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase |
TIGRFAM ID | [TIGR01085] UDP-N-acetylmuramyl-tripeptide synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTATTAA ATGATTTATT AGCGCCGTGG TTCCATTACT CTGGTCGCGA ATCCGTTAAT GGATTAACGC TAGACAGCCG TGACGTTGAA CGTGGCGGTT TATTTGTGGC ATTACCAGGT CATAAAGTCG ATGGTCGAGC ATTTATTCCT CAAGCGATTA ATGCTGGAGC AACGGCGATA CTGATCCATA CCGATAATCC AGATGAACAT GGCATAGTCG ATCGTCTTCA ATATACTGTG CCATTAGTGT TTTTTTGCCA ACTAGGCCGC CAATTATCGG CCGTAGCCGC ACAGTTTTAC TTATCCAATA GCCAATCGTT ATCTTTAATT GGGATCACCG GTACCAATGG CAAAACATCT GTAAGCCAAA TTATTGCTCA AATTGTTTAT TTACTCGGAC ATCAAGCCGC TGTAATGGGC ACATTAGGAA ATGGTTTGTG GGGCCAACTT GTAGATAGCG GCAATACGAC TGCTGATGCC ATAACGGTCA TGCGCCAACT TAGTGAGTTT GCAGCAGAAG GTGCTGAACT GTGTGCTATG GAAGTGTCCA GCCATGGTTT AGTACAAGGG CGTGTTGAAG CTGCACCATT TGAGATTGCA GTGTTTACAA ATTTAAGCCG CGATCATCTA GATTATCATG GTGATATGGA TTCCTACGCC GCTGCTAAAA AACGCTTATT TAAATTTCCT AGCATAAAGC ATGGTGTGAT TAACATTGAT GATGCTGTGG GTGCGAAATG GTTGACCGAA TTGGCGAGCG ACCAGAATAA ATCTTTCAGC ATTAAAGGGA ATTCTGCTGC CGACTTTTAC TGTGATGCCA TTGAATATCA TGATGCAGGT GTCACCGCGA CATTGCATTT TGTCGAAATT GATAGTGAAA AGTCAGTAAG TGTGCAGCTT AACTCGCCGC TATTAGGTGC ATTTAACTTG TCTAACCTAG TGGCAGCAAT AGCTGTTTTG TATTTACAGG GCAAGCCAAT GGCATCTATT TTGGCTGTGC TCCCATTGTT GATTCCTGTT GCGGGTCGTA TGGAGCGTTT TTCATCTGTT AACAACGCTA CTTTGGTTGT TGATTATGCC CATACTCCAG ATGCAATTGA GCAAGCATTA AAAGCATTAA GGTTGCACTG CAAAGGAACG TTATGGTGCG TATTTGGCTG CGGTGGCGAT CGTGATAAAG GTAAACGTCC TTTGATGGCA CAAGCCGCTG AGCGATATGC AGATAAAGTG ATGATCACAA GTGACAATGC GCGTAGTGAA GATCCACAAA CAATTATCAA CGATATTTTA CAGGGTATTA GTCAACCTCA AAAGGTGCTT ACCCGGGTAG ACCGGATTGA AGCCATTACC CATGTTGTTT CATTAGCACA AGTTAACGAT ATTGTACTGC TTGCTGGTAA AGGTCATGAA ACCTATCAAG AAGTGGCAGG TGAACGTATT GATTATGATG AACGCGCTTT GGCATTTAAG TTGTCTCAGG AGGCATCATG A
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Protein sequence | MLLNDLLAPW FHYSGRESVN GLTLDSRDVE RGGLFVALPG HKVDGRAFIP QAINAGATAI LIHTDNPDEH GIVDRLQYTV PLVFFCQLGR QLSAVAAQFY LSNSQSLSLI GITGTNGKTS VSQIIAQIVY LLGHQAAVMG TLGNGLWGQL VDSGNTTADA ITVMRQLSEF AAEGAELCAM EVSSHGLVQG RVEAAPFEIA VFTNLSRDHL DYHGDMDSYA AAKKRLFKFP SIKHGVINID DAVGAKWLTE LASDQNKSFS IKGNSAADFY CDAIEYHDAG VTATLHFVEI DSEKSVSVQL NSPLLGAFNL SNLVAAIAVL YLQGKPMASI LAVLPLLIPV AGRMERFSSV NNATLVVDYA HTPDAIEQAL KALRLHCKGT LWCVFGCGGD RDKGKRPLMA QAAERYADKV MITSDNARSE DPQTIINDIL QGISQPQKVL TRVDRIEAIT HVVSLAQVND IVLLAGKGHE TYQEVAGERI DYDERALAFK LSQEAS
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