Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_3794 |
Symbol | |
ID | 4280685 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 4518767 |
End bp | 4519303 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638136608 |
Product | ISSod10, transposase OrfB |
Protein accession | YP_752458 |
Protein GI | 114564944 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000142272 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCGTTAG ATCGCATTGA TGTTTGGTTT CAAGATGAAG CTAGATTTGG TCAGCAAAAT ACCACGACCC GCATTTGGGC AACGAAAGGA ACCCGACCAC GAGCGGTAAG GCAACAACAG TTCGAATCAG CATATTTATA TGGTGCGGTG TGTCCTGCAA CGGGCACGAC AGAGGCTATT ATTGCCCCGC ATGCCAACAG TGAATATATG TGGGAGCATT TAACATTAAT TTCAGAGGCT ACCGAATCGG GTCGCCATGC TTTGGTCATC ATGGATGGTG CAGGTTGGCA TCAACAAGAT CTGACTGAGG ACTTTGATAA CCTTAGTATC CTTAAGCTTC CGCCCTATTC GCCAGAACTC AACCCTATAG AACAAGTGTG GCAATGGCTT CGTCAGAATG AACTCGCAAA TCGTTGCTTT AGTGGATATG ACGATATTGT TGAGCAGTGT TCCATTGCAT GGAATCGATT TATTGCAGAG CCGGAAAGGG TGATTCAACT ATGTTCTAGA CGGTGGACAA AATTGACCAT CGCTTAG
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Protein sequence | MALDRIDVWF QDEARFGQQN TTTRIWATKG TRPRAVRQQQ FESAYLYGAV CPATGTTEAI IAPHANSEYM WEHLTLISEA TESGRHALVI MDGAGWHQQD LTEDFDNLSI LKLPPYSPEL NPIEQVWQWL RQNELANRCF SGYDDIVEQC SIAWNRFIAE PERVIQLCSR RWTKLTIA
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