| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3745 |
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| Symbol | |
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| ID | 4280638 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 4451945 |
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| End bp | 4452550 |
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| Gene Length | 606 bp |
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| Protein Length | 201 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638136558 |
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| Product | methylation site containing protein |
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| Protein accession | YP_752411 |
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| Protein GI | 114564897 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0403042 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAATTGA AACAACAAGG TTTTTCATTG ATCGAGTTGG TCATTGTTAT TGTCATCCTC
GGTTTATTAG CCGCTACAGC GATCCCGCGT TTTTTAAATG TAACCGATGA TGCTGAAGAC
GCCAGCGTTG ATGGTGTTGC TGGTGGTTTA GCCACAGCAG TGAGCTTTGT ACGTGCACAA
TGGGAAGTTG ATGGTCGTCG TAACAACAGC GTTATTTTAG ATGGTACTAG CGTATCACTC
GATACACGTT TTGGTTTTCC AACTGGCACA ACCAATACTG ATGTTACCTC AATGACAAAC
GAAACATGTC AGGAAGTATT TGATTCAGTT TTACAAAATG CTCCAAGAAA TGTACTGTTC
GATCAAGACG CCCGTAAACA TCGTTATACC GTAAGAATGC AAAATGGTGT CGGCGGTTCA
TCTACCAGTA TTGATGGCCA AACTGTTACA GGTCTAGATT TGTGTGTTTA TCATCAAGTC
GCTACTTTAG CGCTAAATCA GACTTCGGGT GTCGCAGATC CTGCGCCTGA TTTAGACACT
GTTGGTGCTA ACGGTGTAAC ATATAATGCA GGTACAGGTC AGGTAGTATC ATTTACTAAC
AACTAA
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| Protein sequence | MKLKQQGFSL IELVIVIVIL GLLAATAIPR FLNVTDDAED ASVDGVAGGL ATAVSFVRAQ
WEVDGRRNNS VILDGTSVSL DTRFGFPTGT TNTDVTSMTN ETCQEVFDSV LQNAPRNVLF
DQDARKHRYT VRMQNGVGGS STSIDGQTVT GLDLCVYHQV ATLALNQTSG VADPAPDLDT
VGANGVTYNA GTGQVVSFTN N
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