Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_3736 |
Symbol | |
ID | 4280629 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 4441496 |
End bp | 4441987 |
Gene Length | 492 bp |
Protein Length | 163 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638136549 |
Product | rod shape-determining protein MreD |
Protein accession | YP_752402 |
Protein GI | 114564888 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2891] Cell shape-determining protein |
TIGRFAM ID | [TIGR03426] rod shape-determining protein MreD |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.284622 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGCAC ATATTGCAAA TGGTCGCTTA GTGGTATGGC TGACCTTATT CATCGGGATG ATGTTTCAGA TTATGCCGTT GCCAAAAATG GTAGAAGCCT GGCGACCGGA TTGGCTATTG ATGGTGATGA TGTATTGGGC CATGGCGCTA CCGCATCGTT ACAGTATTCT CACTGCGTGG TTGTTAGGGG TGATGCTTGA TGTGTTGTTG GGAGCTCATC TAGGGATCCG TTCATTAGCA TTATCATTAG TGATTTATAT TGTGGTGTTG TTGTGCCAAC AGTTACGTAA CTATCCTCGC TGGCAACAGT CGTTACTAGT TGCATGTTTT ATTTGTATTT ATCATGCAGT GATATTTTGG GTGCAGTTTG TTGTTGTTGG CGCAGCCCCA TTTAATGTGG ACATGTTTTT ACCCGCTATT TCGAGTTTAT TTATTTGGTG GTGGGTGTTT TGGGTGTTAC GCAATATGCG CCGCCATTAT AAAGTACGTT AA
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Protein sequence | MSAHIANGRL VVWLTLFIGM MFQIMPLPKM VEAWRPDWLL MVMMYWAMAL PHRYSILTAW LLGVMLDVLL GAHLGIRSLA LSLVIYIVVL LCQQLRNYPR WQQSLLVACF ICIYHAVIFW VQFVVVGAAP FNVDMFLPAI SSLFIWWWVF WVLRNMRRHY KVR
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