| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3730 |
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| Symbol | |
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| ID | 4280623 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 4431033 |
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| End bp | 4432466 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638136543 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_752396 |
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| Protein GI | 114564882 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTGCAC AACGTCATAT CAGTACATAT TGTCGCAGAC GAGTGAGCCT TACTCTGTGC
TTCAGTGTTT TATTTGTTCA TCTTAGTGTT TTTGCAGAAC CCGTTACCTT TAGTCATGCT
TGGCAGCAAT TGGCGCAAGT GAGTGATCAG CTTCAAGCTA AAGCTCAGCT AGTCAACCGT
GCCAAAGCGG AAGAAGATGC AGGTGATGCG TTAAATTACC CGTCACTTAA TATTGCTGGC
AGCTATACTC GCCTCGAAAA ACCTATCGAA CTTGATTTAC GTGACTTGAA TCCATTAGCG
ACTCTCGACA CAAGTACATT ACCAGCAGCT CTTAGTAGTG CATTAGCTGA AATTCCAGGC
TCTCTTTTTG TCACTCCTTT TACCGAACAA GATGTGTTTC GTGCCAGTTT GCAAGCCATG
TGGCCCATTT ATACCGGCGG TAAAATTACC GCAGCCCAAG GAATACATGC AGCCCAAGTT
TCAGAGAGAG AACAAGAGTT TGCCCTCGCT CGGCGTGAGT TATTTCTTCA GTTAGTTGAT
CGCTACTACG CAGTGTCGGT GACCAAAACC TTAGTAGATA CCCAAAAGCA GCTGGTGGAC
TCGTTAACCT TACATGTGAG TCATGCGCAA AAATTAGAGC AACAAGGGCA AATCGCCAAA
GTTGAACGCT TAAATGCCCA AGTCGCGTTA GAAAATGCCA AAGTAAACTG GGGTAAAACC
AAGCGTCAAT ACGAAATGAC CGAAATAGCT TTAGCAAGGA TGTTACACAT ACCGTCGGTC
GAGCCTATTT CGGCACTGTT TTTACTCGAA CAACAACCTT CATTGCCCTA TCTTAGTCAG
CTGACATTAA CTCAGCATCC GGCATTAAAA TTACTCGAAG CTAAAGAAGC CCAAGCCAAT
GGTTTAGTCG ACTTAGAAAA GGGTAGTTAT TATCCCACGG TGTATTTATA CGGTAACTAC
ACCTTGTATG AAGATGACAG TTTATTTTCC CAAGTGGAGC CCGACTGGAT GGTGGGAGTT
GGGATGAGCA TACCGCTGAT TAGCCGTGAT GGTCGCAGTG GAAAAGTGCA AGCGGCGAAA
AGTGCTTTGC TGCAAGCGCG TTATACCAAA GCACAAACCA AACAAGATTT AAGTTTGCTG
ATTGATCAGA GTTATCGGCA GATGCTGCAA GCTAAAGAAG AAGCGGATGC GCTGGATGTG
TCATTAGCAT TAGCGACCGA GAATTTACGT TTGCGAGAGT TGTCCTTTAA CCAAGGCTTA
TCCACTTCAA TTGATAGAAT CGATGCTGAG TTAAGCTTAA CTGCGGTTAA AACTCAGCAG
TTAGGCGCTA AATATCGTTA TATGCAAGCC TACGCCAAAG TGATGGCCAT TAGTGGTCAA
GTAGAAGAAT TTATTAACCG AACTCAATTT CAAGGGGCTG CTAATGCGGG CTAA
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| Protein sequence | MVAQRHISTY CRRRVSLTLC FSVLFVHLSV FAEPVTFSHA WQQLAQVSDQ LQAKAQLVNR
AKAEEDAGDA LNYPSLNIAG SYTRLEKPIE LDLRDLNPLA TLDTSTLPAA LSSALAEIPG
SLFVTPFTEQ DVFRASLQAM WPIYTGGKIT AAQGIHAAQV SEREQEFALA RRELFLQLVD
RYYAVSVTKT LVDTQKQLVD SLTLHVSHAQ KLEQQGQIAK VERLNAQVAL ENAKVNWGKT
KRQYEMTEIA LARMLHIPSV EPISALFLLE QQPSLPYLSQ LTLTQHPALK LLEAKEAQAN
GLVDLEKGSY YPTVYLYGNY TLYEDDSLFS QVEPDWMVGV GMSIPLISRD GRSGKVQAAK
SALLQARYTK AQTKQDLSLL IDQSYRQMLQ AKEEADALDV SLALATENLR LRELSFNQGL
STSIDRIDAE LSLTAVKTQQ LGAKYRYMQA YAKVMAISGQ VEEFINRTQF QGAANAG
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