| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3712 |
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| Symbol | |
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| ID | 4280605 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 4402371 |
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| End bp | 4405232 |
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| Gene Length | 2862 bp |
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| Protein Length | 953 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638136525 |
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| Product | excinuclease ABC, A subunit |
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| Protein accession | YP_752378 |
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| Protein GI | 114564864 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0178] Excinuclease ATPase subunit |
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| TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0944752 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAAAA TTGAAATACG CGGTGCCAGA ACCCACAATC TTAAGAACAT CAATCTAACC
ATTCCCCGTG ACAAACTCAT TGTGATAACT GGGTTATCCG GTTCAGGAAA ATCATCATTA
GCCTTCGATA CTTTGTATGC AGAAGGCCAA CGTCGTTATG TCGAATCGCT GTCGGCGTAT
GCACGTCAAT TCTTGAGCTT AATGGAAAAA CCCGATGTTG ATCATATTGA AGGCTTAAGC
CCTGCCATTT CAATTGAGCA AAAATCAACC TCGCACAATC CACGATCTAC GGTCGGTACC
ATTACCGAAA TCTATGACTA TTTACGCTTG TTGTTTGCCC GTGTGGGTGA GCCTCGCTGC
CCAACGCATA ATCAACCCTT GTCGGCGCAA ACAGTCAGCC AGATGGTTGA TAAAGTATTG
GCGATGCCAG CAGACAGCCG TCAAATGCTG CTTGCTCCAG TGGTTAACGA CCGTAAAGGT
GAACACGTTA AATTGCTTGA AAGCTTATCG GCACAAGGCT ACATCCGCGC CCGTATTGAC
GGTGAAGTAT GTGACTTAAC GGATCCTCCA ACATTAGATT TACACATCAA ACATACTATT
GAAGTGGTTG TCGATCGCTT CAAAGTACGC GAAGACATGA AACAGCGTTT GGCTGAGTCG
TTTGAAACCG CTTTAGAATT ATCTGGTGGC ATTGCAAAAA TTGCCAGTAT GGATGATAGC
AAAGCCGAAG AACTGATATT TTCAGCTAAT TTCGCGTGTC CGCATTGTGG CTATTCGATG
GCCGAACTTG AGCCGCGTAT TTTCTCGTTT AACAATCCGG CCGGTGCTTG TCAAACTTGT
GATGGTTTAG GTGTGCAGCA GTTTTTTGAC CCTGAGCGAG TAATTGCTAA TGATGAACTC
TCATTAGCAG GCGGCGCGAT CAGAGGCTGG GACCGACGCA ACTTTTACTA TTTCCAGATG
CTCAGCTCGC TAGCCGAACA TTATAAGTTT GATGTTGAGA AGCCATATGC CGAACTAAGC
GACAAAGTTA GAAAGATCGT CTTATATGGT TCAGGCAAAC AAAATATTGC CTTTAAATAC
ATTAATGACC GCGGCGACGT AGTGATCCGT AATCATCCGT TTGAGGGCAT TTTAAATAAT
ATGGATCGCC GTTATCGTGA AACCGAAAGT AACTCGGTGC GCGATGAGCT GTCTAAATTT
ATTAATATGC AGCCGTGTAA CAGCTGTGGT GGTTCGCGCT TACGTGAAGA AGCCCGTAAC
GTATTTATTG GTGAGTTAAA CCTACCGCAA CTGACAATGT GGTCGATTGG CGAAGCCAAA
CAATACTTCG ACACCGTAGT GTTTGAAGGT CAACGCGCAC AAATTGCCGA GAAAATATTA
AAAGAGATCA GTCAACGCCT TGGCTTCTTG GTCAATGTGG GGCTTAACTA TTTAAGCTTA
TCGCGCTCAG CTGAAACTTT ATCGGGTGGC GAGGCGCAAC GTATTCGCTT AGCCAGCCAA
ATTGGTGCGG GTTTAGTGGG CGTAATGTAC GTGCTTGATG AGCCTTCAAT TGGTTTGCAT
CAACGCGATA ACGAACGTTT ATTACAAACC CTTATCCATC TGCGTGATTT AGGCAATACC
GTGATTGTGG TTGAACACGA TGAAGATGCG ATTCGCTTAG CGGATCACAT TATCGATATT
GGCCCTGGTG CTGGTGTACA TGGTGGTGAA GTGATTTGTG ACGGTACCCT AGAAGATATT
CTTAACTGTG AAGAGTCGGT TACGGGCCAA TATATTTCCG GTAAAAAGCA AATACACATT
AGTGACCAGC GCACCCCTAT CGATCCGAAA AAGGTGATTG AGTTATTTGG CGCATCGGGT
AATAACCTAA GAGATGTTGA TTTAACCATT CCAGTTGGAT TGTTTACCTG TGTTACTGGC
GTATCGGGTT CAGGTAAATC AACACTGATT AACGACACCT TCTTTAAAAT TGCCCATCGG
ATGCTCAATG GCGCTACCGT TGATGAACCT GCACCCTACA GAAGCATTGA AGGCATGGAT
CATTGCGACA AAGTAGTCGA TATTGATCAA AGCCCTATTG GCCGTACGCC ACGCTCGAAC
CCTGCCACCT ATACGGGTAT TTTCACCCCA ATACGTGAAC TGTTTGCTGG CACACAAGAA
TCGCGCACCC GTGGTTATCA GGTGGGTCGC TTCTCGTTTA ACGTCAAGGG CGGTCGTTGT
GAAGCCTGCC AAGGTGATGG GTTAATTAAA GTGGAAATGC ACTTTTTACC TGATGTTTAT
GTTCCTTGTG ATTCGTGTAA AGGTAAGCGT TATAACCGCG AAACCTTAGA AGTAAAATAC
AAAGGCAAAA ACATTCACGA AGTGCTGCAA ATGACGGTTG AAGATGCTCG TGGCTATTTT
GATGCGATTC CATCTATTTC ACGTAAATTG CAAACCTTAA TGGATGTCGG CTTGTCGTAC
ATTCGCTTAG GACAAAGCGC GACAACCTTA TCTGGCGGTG AAGCTCAGCG CGTTAAACTG
GCCAAAGAGT TGTCTAAACG CGATACAGGT AAAACCTTAT ACATTTTAGA TGAACCCACT
ACAGGGCTTC ACTTTGCCGA TATTCAACTA TTGTTAGAAG TACTGCATCG CTTAAAGTCT
CATGGCAACA CTGTTGTGGT GATTGAGCAT AATCTAGATG TGATTAAAAC CGCAGACTGG
ATTATCGATT TAGGCCCTGA AGGTGGTGCT GGCGGCGGCA TGATTTTAGC CGCAGGCAGC
CCAGAAGAAG TAGCAGAGCA CCCAGAGTCT CATACCGCGA GATTCTTAAA GCCGATGTTG
GCGCTTCACA GCAAACGTAT AAAGGCTAAA AAAGCCAAAT AA
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| Protein sequence | MDKIEIRGAR THNLKNINLT IPRDKLIVIT GLSGSGKSSL AFDTLYAEGQ RRYVESLSAY
ARQFLSLMEK PDVDHIEGLS PAISIEQKST SHNPRSTVGT ITEIYDYLRL LFARVGEPRC
PTHNQPLSAQ TVSQMVDKVL AMPADSRQML LAPVVNDRKG EHVKLLESLS AQGYIRARID
GEVCDLTDPP TLDLHIKHTI EVVVDRFKVR EDMKQRLAES FETALELSGG IAKIASMDDS
KAEELIFSAN FACPHCGYSM AELEPRIFSF NNPAGACQTC DGLGVQQFFD PERVIANDEL
SLAGGAIRGW DRRNFYYFQM LSSLAEHYKF DVEKPYAELS DKVRKIVLYG SGKQNIAFKY
INDRGDVVIR NHPFEGILNN MDRRYRETES NSVRDELSKF INMQPCNSCG GSRLREEARN
VFIGELNLPQ LTMWSIGEAK QYFDTVVFEG QRAQIAEKIL KEISQRLGFL VNVGLNYLSL
SRSAETLSGG EAQRIRLASQ IGAGLVGVMY VLDEPSIGLH QRDNERLLQT LIHLRDLGNT
VIVVEHDEDA IRLADHIIDI GPGAGVHGGE VICDGTLEDI LNCEESVTGQ YISGKKQIHI
SDQRTPIDPK KVIELFGASG NNLRDVDLTI PVGLFTCVTG VSGSGKSTLI NDTFFKIAHR
MLNGATVDEP APYRSIEGMD HCDKVVDIDQ SPIGRTPRSN PATYTGIFTP IRELFAGTQE
SRTRGYQVGR FSFNVKGGRC EACQGDGLIK VEMHFLPDVY VPCDSCKGKR YNRETLEVKY
KGKNIHEVLQ MTVEDARGYF DAIPSISRKL QTLMDVGLSY IRLGQSATTL SGGEAQRVKL
AKELSKRDTG KTLYILDEPT TGLHFADIQL LLEVLHRLKS HGNTVVVIEH NLDVIKTADW
IIDLGPEGGA GGGMILAAGS PEEVAEHPES HTARFLKPML ALHSKRIKAK KAK
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