| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3709 |
|---|
| Symbol | |
|---|
| ID | 4280602 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella frigidimarina NCIMB 400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008345 |
|---|
| Strand | + |
|---|
| Start bp | 4399048 |
|---|
| End bp | 4399794 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 638136522 |
|---|
| Product | putative hydrolase |
|---|
| Protein accession | YP_752375 |
|---|
| Protein GI | 114564861 |
|---|
| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1387] Histidinol phosphatase and related hydrolases of the PHP family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0000275833 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTCC TTGTTGATAT TCACGCGCAT ACTATAGCGT CAACTCACGC TTATAGTACC
TTCCATGATT ACCTTGGTGT TGCGAAAGCC AAAGGTATCA AGTTATTCGC CATTACCGAT
CATGGCCCAG ATATGGCTGA TGCGCCCCAT TTTTGGCACT TTGTAAATAT GAGAGTGTTA
CCTAGAATTG TTGACGGTGT CGGCGTGCTG CGCGGCATTG AAGCGAATAT CAAAAATGAA
CATGGCGAGA TTGATTTTTT TGGTGATTAT TTAAAAGAAC TCGATATTGT GTTGGCAGGT
TTCCATGAAC CCGTTTTCCC ACCATCGACT AAAGAAGCTC ACACTACAGC ACTTATTAAC
AGTATTGAAA GTGGTAATGT CGACATTATT ACTCACCCAG GCAACCCTGC TTATCCAATC
GATGTTAAGC GTGTCGCCTC TGCCGCTGCC AAACATAACG TGGCGCTAGA GATAAATAAC
TCCTCTTTTT TGACGTCCAG AAAAGGCAGT ACATGTAACT GTATTGAAAT CGCCAATGCA
GTAAAAGCAG CAGGTGGACT GCTCGTGATG GGTTCTGACT CACACGTTGC TTTTAGCTTA
GGCGAGTTTG AAAAAGCCAT TGAGGTGATT GAAACAGTGG GGTTTCCAAT TGAACGCTTA
CTGAACCGAA GCCCTGAAGC GTTGTTGAGC TTTCTGACGG CAAGAGGTCA TAAGTCACTT
GATGAATATT CAGCTTTAAT CGACTAA
|
|---|
| Protein sequence | MKFLVDIHAH TIASTHAYST FHDYLGVAKA KGIKLFAITD HGPDMADAPH FWHFVNMRVL
PRIVDGVGVL RGIEANIKNE HGEIDFFGDY LKELDIVLAG FHEPVFPPST KEAHTTALIN
SIESGNVDII THPGNPAYPI DVKRVASAAA KHNVALEINN SSFLTSRKGS TCNCIEIANA
VKAAGGLLVM GSDSHVAFSL GEFEKAIEVI ETVGFPIERL LNRSPEALLS FLTARGHKSL
DEYSALID
|
|---|
| |