Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_3688 |
Symbol | |
ID | 4280581 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 4375464 |
End bp | 4376849 |
Gene Length | 1386 bp |
Protein Length | 461 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638136501 |
Product | two component, sigma54 specific, transcriptional regulator, Fis family protein |
Protein accession | YP_752354 |
Protein GI | 114564840 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACTAG CCAGAAATAT TCTGTTAATC GACGACGAAG CTGCATGGTT ACGAACACTC GCGATAACCC TTAACCGCCT AGTTCCCGAA GCTGAAATTG ACACTTGTGT CGACAGTCGC CAGGTGAGTA GTCGCTTACA GGTTGGCGAC TATGCGCTAG TGCTAGTTGA TCTCACTATG CCATTTCACT CCGGTGAAGA ATTATTAGCG ATGATCCGCA GCGATTTCCC TAACACTCGA GTCATTATAG TGACTGGGGT AAATGAGGTT GATACTGCAG TTCGTTGTAT TAAGAATGGT GCTTATGACT ACTTTATTAA AACAGACAAT GTCGATGAAC TTGCACGAAC AGTTCGCCGT GCACTTGAAG TGGTCGGGCT TGAAAGAAAC TACCTTTATA TCAAAGAGAA ATTTTTAAGC CGAACCTTAG ATAACCCGCA AGCATTCAAT AACATGTTAA CTTGCGAGCC ACAGCTATTA GATCAGTTTC GTTATCTTGA AGCCGTATCA TGTAGCCCTG AGCCCTTGTT AATTTATGGC GCTAGCGGAA CCGGTAAAAG CGAGTTTGCT CAATCTTGCC ATGCACTTTA TAGCCCTAAT GAACCCTTCG TTAGCATTAA TCTTGCGGGT ATTAGTTGTG AGTCATTTGA GCAAAAAATG TGTGGTCAAC TGTATCATCA CAATAATGGC GAGCTAGAAG CAGTTGCAGG TTTATTGCAT CAAGTGGGCA GTGGGGTACT CTATCTTAAT GAAATTGGCA CGCTACCATT GGATGCTCAA GTTAAGTTAT TAGCGCTGTT AGAAAGCAAA CAATATTACC CTTTAGGTAG CGACACTGCC TATCCGGTAA AATGTAAGTT TGTGGTATCA ACTCAAGATG ATTTACTCAA ACTTCATCAA GCAGGTAAGT TTAGGAGCGA TCTACTCTAC CGTTTACGGG CACATAAAAT TAAATTACCG CCATTAGCTG AAAGGCAGTT AGATATTGCG ATGTTGATCA ATCATTTCAT CGCCCTAGCC GCAGCAGAAA TGAATTTACC AGCGCCGATT CAACCTGCAG ATTTAGCCTC TAGACTAGCC AGTTATGATT TCCCCGGTAA TCTACACGAG CTCAAAGGCA TGGTATTTGA TGCCGTTAGT CGCAGTGATG GCATAGCGCT TAACACCTCT GCTTTTATGG AAGCCATTAA TGAACACAAA TCATTAACGG CAGTACCGCA AGACCGAATT ATCTTTCCTA AACAACTGCC TACCATTGCA CAGATGAACC AAGCGTTAAT GGACGAAGCC ATGAGCCGTA CAGCTAACAA CCAAACAGCG GCAGCGCAAA TATTGGGAAT TAGCCAAAGT GCATTAAGCA GGCGGTTGAA GGGCATTAGA TGTTAA
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Protein sequence | MKLARNILLI DDEAAWLRTL AITLNRLVPE AEIDTCVDSR QVSSRLQVGD YALVLVDLTM PFHSGEELLA MIRSDFPNTR VIIVTGVNEV DTAVRCIKNG AYDYFIKTDN VDELARTVRR ALEVVGLERN YLYIKEKFLS RTLDNPQAFN NMLTCEPQLL DQFRYLEAVS CSPEPLLIYG ASGTGKSEFA QSCHALYSPN EPFVSINLAG ISCESFEQKM CGQLYHHNNG ELEAVAGLLH QVGSGVLYLN EIGTLPLDAQ VKLLALLESK QYYPLGSDTA YPVKCKFVVS TQDDLLKLHQ AGKFRSDLLY RLRAHKIKLP PLAERQLDIA MLINHFIALA AAEMNLPAPI QPADLASRLA SYDFPGNLHE LKGMVFDAVS RSDGIALNTS AFMEAINEHK SLTAVPQDRI IFPKQLPTIA QMNQALMDEA MSRTANNQTA AAQILGISQS ALSRRLKGIR C
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