Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_3683 |
Symbol | |
ID | 4280576 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 4367708 |
End bp | 4368370 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638136496 |
Product | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein |
Protein accession | YP_752349 |
Protein GI | 114564835 |
COG category | [C] Energy production and conversion |
COG ID | [COG0437] Fe-S-cluster-containing hydrogenase components 1 |
TIGRFAM ID | [TIGR02951] DMSO reductase, iron-sulfur subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.942546 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGAAC AAACTCAATA TGGTTTTTAT TTAGATACCA CCAAGTGCAC AGGTTGTAAA GCGTGTCACA TATCTTGTAA AGATAGACAA GGTGATATTA TTCGCAAAAC TAATCCAATT GAACAAGGTG TACCGGCATT AGAAGGTATT AACTGGCGCC GAGTATATGA ATATGGTGGT GGTGATTGGT CTACTAATGC TGACGGTAGT TTCGAGCAAA ATGTTTTCTC TTATTACACC TCTATTAGCT GTAATCATTG TAACGAGCCT GTATGTGTAA AAGCATGTCC TACTGGTGCC ATGCATAAGC GTCGTGAGGA TGGGTTAGTT CTTGTTCATA CAGACTTATG TATTGGTTGT AATAGTTGCG CTGAGGCTTG CCCATATGAC GCTCCACAAT TAGATCCCCA ACGGAAAGTA ATGACTAAGT GTGATGGTTG TTACGATAGA TTAGCACAAG GAAAGCAGCC CATTTGTGTT GGTTCATGCC CATTACGTGC ATTGGATTTT GATACGATGG AAAACTTACG TGCTAAGTAT GGTAATGGCG ACGGACATAT AGCACCACTA CCACCACAAA GTATTACCTC ACCAAACTTG ATCATAAAAG CAAACAAGAA CGGTGGCCGC CAAGGTGAAG TGTTGAACTA CTCTGAAGTT TAA
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Protein sequence | MTEQTQYGFY LDTTKCTGCK ACHISCKDRQ GDIIRKTNPI EQGVPALEGI NWRRVYEYGG GDWSTNADGS FEQNVFSYYT SISCNHCNEP VCVKACPTGA MHKRREDGLV LVHTDLCIGC NSCAEACPYD APQLDPQRKV MTKCDGCYDR LAQGKQPICV GSCPLRALDF DTMENLRAKY GNGDGHIAPL PPQSITSPNL IIKANKNGGR QGEVLNYSEV
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