| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3660 |
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| Symbol | groEL |
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| ID | 4280553 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 4339965 |
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| End bp | 4341602 |
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| Gene Length | 1638 bp |
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| Protein Length | 545 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638136473 |
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| Product | chaperonin GroEL |
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| Protein accession | YP_752326 |
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| Protein GI | 114564812 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
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| TIGRFAM ID | [TIGR02348] chaperonin GroL |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000280031 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGCAA AAGAAGTCTT ATTTGGTAAC GACGCACGCG TAAAAATGCT TGCTGGTGTT
AACATCCTAG CCAACGCAGT TAAAGTAACC TTAGGCCCTA AAGGCCGTAA CGTTGTTTTA
GATAAAAGCT TTGGTTCGCC AATGATCACC AAAGATGGTG TGTCAGTTGC TAAAGAAATC
GAACTAACAG ACAAGTTCGA AAACATGGGC GCACAAATGG TTAAAGAAGT TGCTTCTAAA
GCCAATGATG CTGCCGGTGA CGGTACCACT ACTGCAACAG TATTAGCACA AGCTATTGTT
GTTGAAGGCC TAAAAGCAGT TGCAGCGGGT ATGAACCCAA TGGACCTTAA GCGCGGTATC
GACAAAGCGG TTATCGCAGC CGTTGCTGAA CTTAAACTAC TTTCTCAAGA ATGTTCAGAC
ACTAAAGCGA TTGCTCAAGT AGGTACAATT TCTGCTAACT CTGACGAGTC AATCGGCGAC
ATCATTGCAA CCGCAATGGA AAAAGTCGGT AAAGAAGGCG TTATCACCGT TGAAGAAGGC
CAAGCGCTTG AAAACGAATT AGACGTTGTT GAAGGTATGC AGTTTGACCG TGGTTATTTA
TCACCATACT TCATCAACAA GCCAGAAACT GGCAGCATTG AATTAGACAG CCCATTCATT
TTATTAGTAG ACAAAAAAGT CTCTAATATC CGTGAATTGT TGCCAATCCT TGAAGGTCTA
GCTAAAACAG GTAAGCCATT GCTTATCGTT GCAGAAGACG TTGAAGGCGA AGCATTAGCA
ACACTAGTTG TGAACAACAT GCGTGGCATC GTTAAAGTAG CTGCTGTTAA AGCTCCTGGC
TTTGGTGACC GTCGTAAAGC AATGCTTCAA GACGTTGCTA TCCTAACTGG CGGTACTGTT
ATCGCTGAAG AAATCGGTCT AGAACTTGAA AAAGCCACTC TAGAAGATTT AGGTACAGCT
AAGCGCGTAA TCATCACTAA AGATAACACT ACAATCATCG ATGGTAGTGG CGACCAAGTG
CAAATTTCTG CACGTGTTTC GCAAATCAAA CAACAAGTTG AAGATTCAAC TTCAGACTAC
GACAAAGAAA AGCTTCAAGA GCGTATGGCT AAGTTAGCTG GCGGTGTTGC AGTAATCAAA
GTTGGCGCAG CAACAGAAGT TGAAATGAAA GAGAAAAAAG CTCGCGTAGA AGATGCATTG
CATGCAACTC GCGCAGCGGT TGAAGAAGGT GTGGTCGCCG GTGGTGGTGT TGCCCTTGTT
CGCGTAGCAA GCAAAATTAA AGATGTTGAA GTATTGAACG AAGACCAAAA GCACGGTGTA
GTAATCGCAC TACGTGCTAT GGAAGCGCCT TTACGTCAAA TCGCAACTAA CGCAGGTCAA
GAAGCATCAG TTGTGGCTAA CACTGTTAAA AACGGCGAAG GTAACTTCGG TTACAACGCG
GGTAACGATA CTTACGGTGA CATGTTAGAA ATGGGTATCC TAGACCCAAC TAAAGTGACT
CGTAGCGCGC TACAGTTCGC CGCATCTATT GCTGGTCTTA TGATCACAAC AGAAGCGATG
ATTGCTGAAG TACCACAAGA TTCTGCACCA GATATGGGCG GAATGGGTGG AATGGGCGGA
ATGGGCGGCA TGATGTAA
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| Protein sequence | MAAKEVLFGN DARVKMLAGV NILANAVKVT LGPKGRNVVL DKSFGSPMIT KDGVSVAKEI
ELTDKFENMG AQMVKEVASK ANDAAGDGTT TATVLAQAIV VEGLKAVAAG MNPMDLKRGI
DKAVIAAVAE LKLLSQECSD TKAIAQVGTI SANSDESIGD IIATAMEKVG KEGVITVEEG
QALENELDVV EGMQFDRGYL SPYFINKPET GSIELDSPFI LLVDKKVSNI RELLPILEGL
AKTGKPLLIV AEDVEGEALA TLVVNNMRGI VKVAAVKAPG FGDRRKAMLQ DVAILTGGTV
IAEEIGLELE KATLEDLGTA KRVIITKDNT TIIDGSGDQV QISARVSQIK QQVEDSTSDY
DKEKLQERMA KLAGGVAVIK VGAATEVEMK EKKARVEDAL HATRAAVEEG VVAGGGVALV
RVASKIKDVE VLNEDQKHGV VIALRAMEAP LRQIATNAGQ EASVVANTVK NGEGNFGYNA
GNDTYGDMLE MGILDPTKVT RSALQFAASI AGLMITTEAM IAEVPQDSAP DMGGMGGMGG
MGGMM
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