| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3635 |
|---|
| Symbol | |
|---|
| ID | 4280528 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella frigidimarina NCIMB 400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008345 |
|---|
| Strand | - |
|---|
| Start bp | 4312473 |
|---|
| End bp | 4314566 |
|---|
| Gene Length | 2094 bp |
|---|
| Protein Length | 697 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 638136448 |
|---|
| Product | prolyl oligopeptidase |
|---|
| Protein accession | YP_752301 |
|---|
| Protein GI | 114564787 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1505] Serine proteases of the peptidase family S9A |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTAAGC GAATCATACC CTTATGTATA GCGAGTGCGA TGACAATGGC TACACCAGTT
AATGCAGAAG AAGACAAATA TATTTGGTTA GAAGATGTTG AAGGCGCTAA GCCGCTGGCG
TGGGTTAAGC AGCAAAATGC TGTGTCTGCA ACACACATTA AGGCTTACTC AGGTTTTGAT
AACTTAGTAT CAAACAGCCT AGAGATTTTA AACGATAAAG CCCGTATTCC TTATGCCACT
CGTATTGGCG ATTATTTGTA TAATTTTTGG AAAGACGAAA TCCACGAGCG TGGTATTTAT
CGTCGTACCA CACTGGCGGA ATATGCTAAG GCTGAACCCA ACTGGGAAAC CGTGCTTGAT
ATCGATGCCC TTGGTAAAGC AGAGGGGGTT AATTGGGTAT TTAAGGGCAT TGAATGCCAA
TATCCACAGA ACGAGCGCTG CTTTGTGTCG TTGTCTCGTG GGGGCGCAGA TGCCGCTGAG
GTGCGAGAAT TTAATTTAAC CGCAAAAGCG TTTGTCGACA GCACTCAAAA GCCGTTTGTG
TTGGCTGAAG CTAAGTCAAG GTTAAGCTGG ATTGATAAAG ATACCGTGTT TGTCGGAACT
GATTTTGGTG ATGCGCAAAG CATGACGGAT TCAGGCTATC CAAGTGTGGT TAAATTATGG
AAACGCGGCA CACCGTTATC TGCAGCCAAA TTAGTGTTTA GAGGTGATAA AGCCTCAGTT
GCCGTGTCGG GTTATGTGAT GTTTGATGAT AAAACACCGC TGAATATCGT CACAGAAAGT
TTAACCTTCT ACACCGCTAA ACATTATGTT TATCAAGATA GTAAGTTAGT GTCGCTGCCT
ATTCCTAAAG ATGCCGATTT AAAAGGTTAC TTTAAAGGTC AGCTATATAT AGAGTTAAAA
AGCGATTTAG TCACCCCCAA AGGTACTTTC AAACAAGGTG CCATTGTTTA CACACCCGTT
GATAAACTCA TTGCGCAAAA ACCTGAGTTT AGTGAACTGG TATCGCCAAC GAAGCATGCT
TCTATTTCAC AAGTCGCATT TAGCCAGAAT GCCATTTTTG TCACTTGGCT AGATGATGTA
AAAAGCAAAC TTGTACGATA CATGCAAAAC GATAAAGGTG AGTGGCAAAG CAAACCTGTG
CCATTTGAAG CCAATGGCAC CTTAAGTGTG TTTGATGTTG AACGTGATAG TGATGATTTT
TTTGTTAATT ACACCAGCTT TTTAGAACCA GCCAGTTTAT ATCGCTTAAA TGGTGCAAGC
TTAAAAACCG ATAAAATTAA AGCCATGCCG CAACAATTTA GCGCCGATAA GTTTGTCACG
AAACAGTACT TTGTTAAGTC AAAAGACGGC ACAAAAGTGC CTTATTTTGT GGTGATGGCT
AAAGACATTA AACTCGATAG CAGTAACCCT ACATTACTTT ATGGTTATGG CGGTTTTGAA
GTATCGCGCT TACCAGCCTA TTCGGCCACT ATTGGTAAAA ACTGGTTAGA GCAGGGCGGT
GTTTATGTAC TTGCTAACAT TCGTGGTGGT GGAGAGTACG GCCCAGCTTG GCATCAAGCA
GCGTTAAAGC AACATCGTCA TAAAGCGTAT GAAGACTTTG AAGCCATTGC TGAAGACTTA
ATTGCCCGTA AAATTACGTC AAGCAAGCAT CTTGGTATTC AAGGTGGTAG TAACGGTGGT
TTGTTAATGG GTGCTGCATT TACTCGTCGT CCTGAGCTGT ATAACGCTGT AGTGTGCCAG
GTGCCATTGT TGGACATGAA GCGCTATAAC AAGTTATTGG CTGGTGCCAG TTGGATGGGC
GAATATGGTA ACCCTGATAT CGCAGAAGAG TGGGAATACA TTAAAACCTA TTCGCCATAT
CACAATTTAA AACAAGGGGT TAAATACCCT AAAGTGTTCT TCACCACGTC AACACGTGAT
GACCGTGTGC ACCCAGCGCA TGCGCGTAAA ATGGTGGCGA AAATGGAAGA CATGGGCATA
GATGTGTTGT ATTACGAAAA CATTGAAGGT GGCCATGCTG GCGCGGCAGA CAATACTCAG
GCCGCCGAGT TAAGTTCAAT GGTTTACGCA TACTTAATGC AACAGCTTCG TTAA
|
|---|
| Protein sequence | MLKRIIPLCI ASAMTMATPV NAEEDKYIWL EDVEGAKPLA WVKQQNAVSA THIKAYSGFD
NLVSNSLEIL NDKARIPYAT RIGDYLYNFW KDEIHERGIY RRTTLAEYAK AEPNWETVLD
IDALGKAEGV NWVFKGIECQ YPQNERCFVS LSRGGADAAE VREFNLTAKA FVDSTQKPFV
LAEAKSRLSW IDKDTVFVGT DFGDAQSMTD SGYPSVVKLW KRGTPLSAAK LVFRGDKASV
AVSGYVMFDD KTPLNIVTES LTFYTAKHYV YQDSKLVSLP IPKDADLKGY FKGQLYIELK
SDLVTPKGTF KQGAIVYTPV DKLIAQKPEF SELVSPTKHA SISQVAFSQN AIFVTWLDDV
KSKLVRYMQN DKGEWQSKPV PFEANGTLSV FDVERDSDDF FVNYTSFLEP ASLYRLNGAS
LKTDKIKAMP QQFSADKFVT KQYFVKSKDG TKVPYFVVMA KDIKLDSSNP TLLYGYGGFE
VSRLPAYSAT IGKNWLEQGG VYVLANIRGG GEYGPAWHQA ALKQHRHKAY EDFEAIAEDL
IARKITSSKH LGIQGGSNGG LLMGAAFTRR PELYNAVVCQ VPLLDMKRYN KLLAGASWMG
EYGNPDIAEE WEYIKTYSPY HNLKQGVKYP KVFFTTSTRD DRVHPAHARK MVAKMEDMGI
DVLYYENIEG GHAGAADNTQ AAELSSMVYA YLMQQLR
|
|---|
| |