| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3613 |
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| Symbol | |
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| ID | 4280506 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 4289579 |
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| End bp | 4291735 |
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| Gene Length | 2157 bp |
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| Protein Length | 718 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638136425 |
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| Product | peptidyl-dipeptidase Dcp |
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| Protein accession | YP_752279 |
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| Protein GI | 114564765 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0339] Zn-dependent oligopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000460509 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTAAAA CACTTATCAC GACTGCAGTT AGTGCTGCAC TGATGCTCAG CGCGTGTTCA
GAGCAATCAG CAGACACCGC CATGGCAGCC AAAACCACAA CAGATGCATC AACAACAATG
ACCAAAGCGC CTGCAACTGC CGACAACGTA CTGTTAACAC CAAGCCCTTT ACAATACATG
GCACCACAGT TCGACAAGTT TAATGCGGGC GACTACTTAC CTGCGTTTGA ACAAGGTATG
CAAGAGCACA AAGCAGAAAT CGCTGCCATT ACTAACAACA CTGAAGCTGC CACGTTTGAC
AATACCATCG TCGCACTTGA AAAAACCGGC GCGATTTTAG ACCGCACTCA ACGGGTATTT
TTCAACCTTT CAGGGCTTAT TTCAGACGAC AACTTCATCA GTGTTGAAGA GCAAATTGTG
CCTAAACTCA CAGCACACCA AGACAACATC TATCTTGATG AAAAACTGTT TGCGCGCATC
CAAGCAATTT ATAAAAACAA AGCCACATTA ACAGGCGAAG ACTTACGTTT AGTTGAAGTG
TATTACGACC GCTTTGTCCG TGCCGGTGCT GAATTATCAG TCGCTGACAA AACAACAATG
CGTGAGTTAA ACGGTGAGCT AGCCAAATTT GAAACCAGCT TCTCACAAAA CGTATTAAAG
TCATTTAATG ACGATGTGAT CATAATTGAA GATAAAGCCC TGCTTGATGG CTTATCAGAC
AACGACATTG CATCATTAGC TGCTGCCGCT AAAGCTGCTG GTAAAACGGG TTACATGATC
ACTTTAGTGA ACACCACCAC TCAACCATTG CTTTCTAGCC TTAAAAACCG CGATGTACGT
AAACAGCTAT GGGAAACCTC AGCATATCGC GCCATGGACA CCAACGCGCC GTTAAACATC
AAAATTGCTC AACTGCGTGC ACAAAAAGCC AAACTATTAG GCTACCCAAC ATGGGCGGCA
TACTCTCTAG GCGACCAAAT GGCCAAAAAC CCAGAAGCGG TTTATGGCAT TCTTGATGAC
TTAGCGCCAA AAGCACTGGT TAAAGCCAAA ATTGAAGCGG CAGACATTCA AGCCGAAATC
GTTAAAGACG GTAAAGACTT TACTTTAGAA CCATGGGACT GGGCTTACTA CGCAGAAAAA
GTACGTAAAG CCAAATATGA CCTAGACGAC AACCAAGTTA AGCCATACTT TGAAATGAAC
ACAGTGCTTA ACGACGGATT GTTTTTCGCA ATGGAAAAGC TGTACGGCAT TACAGTTAAA
CCACGTAACG ACCTTCCTGT GTGGCACAAA GACGTCACAG GCTATGAAAT CTTTAACAAA
GACGGCAGCT CAATTGGTTT ATTCTATCTC GATATGTACG CACGCCCTGG TAAGCGTGGT
GGCGCATGGA TGGATGAGTT CGTTAGCCAG TCATTCTTAA AAAATACAAA ACCAGTGGTA
TACAACGCAC TTAACGTGCC AAAACCTGCT GAAGGTCAAC CAACACTGCT AACCTTTGAC
GAAGTGAGCA CGTTATTCCA CGAGTTTGGC CATGCCATTC ACGGTTTATA TTCACAAGTT
AACTACCCAA GCCTAGCCGG TACTTTAACA GCACGTGACT TTGTTGAGTT TCCATCACAA
GCTAACGAAG ACTGGAGCAT CGACCCTGCC GTGCTAGCCA ACTACGCGAA ACACTACCAA
ACTGGTGAGC CGATTCCTGC AGAGTTATTA GGCAAAGTGT TAAAAGCCCA CACCTTTAAC
CAAGGTTTTG GTACAGTTGA ATACTTAGCT GCTGCGCTAC TTGATATGGA ATGGCATTCA
ATTCCAGCAG GCACCGAAAT TACCGATGTA GCCGCTTTTG AGAAACAAGC ACTAGCCAAA
CACGGCCTAG ACTACGGCCC AATTGCGCCA CGCTACAAAA CCACCTACTT TAGCCACAGC
TTCGGCGGCG GTTATTCAGC TGGTTATTAC GCATACCTAT GGACCGAAGT GTTTGCAGCA
GACTCGTTTG CTTACATGAT GGCTCACGGT GGATTAACGT TAGAGAACGG CCAAAAATAC
CGTGACGCAG TATTGTCAAA AGGTAACAGC CGAGATCTAA TGCAAAGCTA TATCGACTTT
GCTGGTAAAA AGCCATCAAC CGACGCCCTA TTAAAGCGTC GTGGTTTAGT TCACTAA
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| Protein sequence | MRKTLITTAV SAALMLSACS EQSADTAMAA KTTTDASTTM TKAPATADNV LLTPSPLQYM
APQFDKFNAG DYLPAFEQGM QEHKAEIAAI TNNTEAATFD NTIVALEKTG AILDRTQRVF
FNLSGLISDD NFISVEEQIV PKLTAHQDNI YLDEKLFARI QAIYKNKATL TGEDLRLVEV
YYDRFVRAGA ELSVADKTTM RELNGELAKF ETSFSQNVLK SFNDDVIIIE DKALLDGLSD
NDIASLAAAA KAAGKTGYMI TLVNTTTQPL LSSLKNRDVR KQLWETSAYR AMDTNAPLNI
KIAQLRAQKA KLLGYPTWAA YSLGDQMAKN PEAVYGILDD LAPKALVKAK IEAADIQAEI
VKDGKDFTLE PWDWAYYAEK VRKAKYDLDD NQVKPYFEMN TVLNDGLFFA MEKLYGITVK
PRNDLPVWHK DVTGYEIFNK DGSSIGLFYL DMYARPGKRG GAWMDEFVSQ SFLKNTKPVV
YNALNVPKPA EGQPTLLTFD EVSTLFHEFG HAIHGLYSQV NYPSLAGTLT ARDFVEFPSQ
ANEDWSIDPA VLANYAKHYQ TGEPIPAELL GKVLKAHTFN QGFGTVEYLA AALLDMEWHS
IPAGTEITDV AAFEKQALAK HGLDYGPIAP RYKTTYFSHS FGGGYSAGYY AYLWTEVFAA
DSFAYMMAHG GLTLENGQKY RDAVLSKGNS RDLMQSYIDF AGKKPSTDAL LKRRGLVH
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