| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3584 |
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| Symbol | |
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| ID | 4280477 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 4258596 |
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| End bp | 4259813 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638136396 |
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| Product | TonB family protein |
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| Protein accession | YP_752250 |
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| Protein GI | 114564736 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG4219] Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTAATT GGTTTATGGA ACAAACCATC TCATTGAGCG TGGTGTGTTT AGTATTACTG
GTATTGCACC GGTTTATATT GTCTAAATTT GGGGCGCACT ATACCTATTT TATGTGGATA
TCCGTGCCAC TCTTAATCAT TGCAGATTTA CTGCAAATGA TATTACCGCA CCACTTTAGC
TGGTTTGGTA GCAATAACGC AGCCTCAATC ATCCAGCAGT ATTATGTGTT TGCTAGCGAT
ACCGCTGCGT TGTCGGCAGG CTTATTTGAC TTATTATATC TGCCATATCT CTACGGTATC
GTTATCACGT TATTAGTCGC TAATATCGTG ATGGAATACG GCTACCTGCA ACGGTTAATC
CAGCGTGGAT GTCAGCTAGA TATTCCTTCT GTAAAGCTTA ACGTATTAGC CCATCCAGAT
ATTGAATCAC CTATGCTCGC AGGGTTTATT ACCCCCAGTA TTTTGGTACC AACAAGCTTT
ACGTTACTCG AAGAAAGCCA GCAGCAAGCC ATTATTCAGC ATGAGATTTA TCACTATCAA
CGTGGTGATT TATGGGCAAA TGCCCTGGCT TATGGATTAA CCGTATTGTT TTGGTTCAAT
CCGTTGATGT GGTTGAGCTA TCGCCGTTTT AGACAAGATC AAGAATTGTC ATGCGATGCG
CAGGTCACTG CCAGCATGAA AGCCCAAGCT AAAATTGCCT ATAGCAGAAC ACTACTGGCC
TATTCACAAC ATGCACCTTT GAGCATGTTA CACACCCATT ATGGGGATAA AACCATCTTA
AAAGAGAGGA TCTTACAGAT GAAAAAGCAA CATGGAAAAA GCACCTTAAC ATTGATTGGA
ATGACATTGG CTATTGGTGT TGGTGCCTTT ATGTTTAATC AGCAGGTATT TGCAGGTAAT
AATCTTAGCG TTGAAAACAA AGCCGATGCT ATGGCGATGC CTGTGATAAG AATTGAGCCT
AGCTACCCAA TTGATGCTGC TAAAGAAGGG CTTAATGGCT ATGTGCAAAT GTCATTTGAT
ATCAGTCCAA ATGGCAGTGT GAACAATGTT AGAGTGACTA AGTCGTCGCC GAAACAAGTG
TTTGATGCAT CGGCAGTTGA GGCACTTGAA CAATGGAAGT ATCAACCCTC TGCAACTGGG
TTTAAAGACC TACAAGTACA GTTAGACTAT GTGATCCATC AGCCTGATAA ATCAGTTGAG
AGAATCACGG TAAAATAA
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| Protein sequence | MINWFMEQTI SLSVVCLVLL VLHRFILSKF GAHYTYFMWI SVPLLIIADL LQMILPHHFS
WFGSNNAASI IQQYYVFASD TAALSAGLFD LLYLPYLYGI VITLLVANIV MEYGYLQRLI
QRGCQLDIPS VKLNVLAHPD IESPMLAGFI TPSILVPTSF TLLEESQQQA IIQHEIYHYQ
RGDLWANALA YGLTVLFWFN PLMWLSYRRF RQDQELSCDA QVTASMKAQA KIAYSRTLLA
YSQHAPLSML HTHYGDKTIL KERILQMKKQ HGKSTLTLIG MTLAIGVGAF MFNQQVFAGN
NLSVENKADA MAMPVIRIEP SYPIDAAKEG LNGYVQMSFD ISPNGSVNNV RVTKSSPKQV
FDASAVEALE QWKYQPSATG FKDLQVQLDY VIHQPDKSVE RITVK
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