Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_3563 |
Symbol | |
ID | 4280456 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 4232630 |
End bp | 4233025 |
Gene Length | 396 bp |
Protein Length | 131 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 638136375 |
Product | transposase |
Protein accession | YP_752229 |
Protein GI | 114564715 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACCTT CAGTATCAAT CAATATAAAA CGTACTCAAC GAGATTACAC GTTAGGCTTT AAATTAGCGG TTGTTAGTCA AGTAGAAAAA GGCGAGCTAA CGTATAAGCA AGCTCAAGAC CATTATGGCA TTCAAGGGAG AAGTACCGTC CTAACATGGT TACGAAAACA TGGTAGATTA GATTGGTCCC AGCCGATTGA GCATTCACCT ATGTCCAAAT CTACAGAAAC ACCCGCCCAG AAAATCAAAC GATTAGAGAA ACAAGTCTCC AATCTCGAAA TGAAAAATAT GATTTATGGC GATATGGTCG AGTTACTTAA AAATGAGTAC GGTATTGATT TAGAAAAAAA GTACTTAGCC GAACGCTCTG GCTTGCCAAA GAAAAAGGCA CTGTAA
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Protein sequence | MKPSVSINIK RTQRDYTLGF KLAVVSQVEK GELTYKQAQD HYGIQGRSTV LTWLRKHGRL DWSQPIEHSP MSKSTETPAQ KIKRLEKQVS NLEMKNMIYG DMVELLKNEY GIDLEKKYLA ERSGLPKKKA L
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