| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3539 |
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| Symbol | |
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| ID | 4280432 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 4208596 |
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| End bp | 4209705 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638136351 |
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| Product | ABC-2 type transporter |
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| Protein accession | YP_752205 |
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| Protein GI | 114564691 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0842] ABC-type multidrug transport system, permease component |
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| TIGRFAM ID | [TIGR00025] ABC transporter efflux protein, DrrB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGAACA GTATTCGCCA TAGCTACATG CGTATTCATG CCATTACCGC TAAAGAAGTT
AAGCAGCTTA TGCGCGATCG AATTACCTTT GCCATGGTGA TAATGATCCC GCTGATCCAG
CTGTTGTTAT TCGGCTATGC CATCAATACT GATGTGCGGG CAATACCAGT AGCAATTGTT
GATCAAAGTG ATTCAGCTGC AGGACGCTGG ATAGTCGAAG CGGTAAAAGT CACCCAGGTA
GTGGAAGTCA CATCCTATCT CACGACAGCA GAGCAAGCAC AGGCTGCTAT TCGCCGTGGT
GACATTAAAG CGGCATTAAT TTTACCGCCT ACTTTGAATG AAAAAATCGC ACGCAATGAA
CCGATTGGCC AATGGATAGT CGATGGTTCA GACACCATGA TTGCAGGCGC GATAAAGCAA
CTGCGCAACC TATCGCTCAA CGATATTGTA CCGGAGCAAA CCAGCAACCA ATCTCGGTTT
GAAGTTAGCT TATTTTATAA TCCGGAGCAG CGATCCGCGG TGAATATTGT TCCAGGTTTA
ATCGCCGTCA TTCTGACCAT GACCATGGTG CTGTTTACTT CATCAGCTAT TGTTCGTGAG
CGTGAACGCG GCAACCTTGA ATTATTGATC ACCACCCCAA TAAAGCCAAT AGAACTGATG
ATTGGAAAAA TATTGCCATA CATCGTCATC GGCTTAGTGC AAATGACCAT TATTTTAGGC
TTAGGCAATA TTATTTTTGC CGTGCCCATC AATGGCGCTA TCAGTCATTT ATTGTTGGGC
ACGTTACTGT TTATTACCGC TAGCCTGACA TTAGGGTTAA TCATATCTAC TATTGCAAAA
ACACAGCTAC AAGCCATGCA AATGACCATT TTTGTATTAT TGCCAACCAT ATTACTCTCT
GGATTTATCA CCCCATTAGA AGCCATGCCG ACAGCAGCAA AATGGATTGC CGAAGCACTG
CCAGGAACCC ATTTTATGCG GGTGATCCGA GCGATTGTGT TAAAAGGGGC AACGTTAGGC
GAGTTAATAA ACGATGTATT GTGGCTGGTG GGTTTTACAG TCATTGGATT ATGGATTGCA
GCGATGCGAT TTAGCAAACG ATTAGATTAA
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| Protein sequence | MLNSIRHSYM RIHAITAKEV KQLMRDRITF AMVIMIPLIQ LLLFGYAINT DVRAIPVAIV
DQSDSAAGRW IVEAVKVTQV VEVTSYLTTA EQAQAAIRRG DIKAALILPP TLNEKIARNE
PIGQWIVDGS DTMIAGAIKQ LRNLSLNDIV PEQTSNQSRF EVSLFYNPEQ RSAVNIVPGL
IAVILTMTMV LFTSSAIVRE RERGNLELLI TTPIKPIELM IGKILPYIVI GLVQMTIILG
LGNIIFAVPI NGAISHLLLG TLLFITASLT LGLIISTIAK TQLQAMQMTI FVLLPTILLS
GFITPLEAMP TAAKWIAEAL PGTHFMRVIR AIVLKGATLG ELINDVLWLV GFTVIGLWIA
AMRFSKRLD
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