Gene Sfri_3533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_3533 
Symbol 
ID4280426 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand+ 
Start bp4202674 
End bp4203360 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content43% 
IMG OID638136345 
Producthypothetical protein 
Protein accessionYP_752199 
Protein GI114564685 
COG category 
COG ID 
TIGRFAM ID[TIGR02001] conserved hypothetical protein, proteobacterial 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAT CACTATATCA AGCAATTGCG TTATCAACAG GCTTATTACT AAGCGGCTCA 
GCCCTTGCTG AAGTCACTGG CAATATTGGC GCAACATCGA ACTACTTATG GCGTGGCACC 
ACACAAACCA ATAATGAAGC AGCCGTTCAA GGTGGCATTG ACTATGCTCA TGAGTCTGGA 
TTTTATGCCG GTACTTGGGT ATCAAATGTC GATTTTGGTG ATGAAACCAG TTACGAACTA 
GACCTTTATG GTGGTTATGG CGGTAACTTT ACTGAAGACC TAACTTACGA CATCAGCTAC 
CTTTATTATG CTTACCCAGA TGCTGGTGGC AGTATTGATT TTGGTGAAGT GGCCTTGGTG 
CTTGGATGGA AATGGTTAGA TGTTGGTTAT TCTCAAGTGA TCAACGCTGA CTCTGATGTG 
TCTGGTGCAA GTGACGAAAC AGATTGGAAC TATATTCAAG CCAATGCCAG TTTCCCGTTA 
ACAGAAAAGC TCAGCATTGC ATTCCACTAC GGTTATTCAC AAGGCGATGT TGTTGAAGAT 
TTATTTGGCG ACACCTATGC AGACTACAAC GTGACTTTAA GCGCTGAAAC AGACCTAGGA 
ACAGTCTCAT TTATGGCCTC TGACACAGAC TTGCCAGACA ATGATGCTAA AGTTGTTTTA 
GGTTACTCAT ATGGCTTTAG CCTATAA
 
Protein sequence
MKKSLYQAIA LSTGLLLSGS ALAEVTGNIG ATSNYLWRGT TQTNNEAAVQ GGIDYAHESG 
FYAGTWVSNV DFGDETSYEL DLYGGYGGNF TEDLTYDISY LYYAYPDAGG SIDFGEVALV 
LGWKWLDVGY SQVINADSDV SGASDETDWN YIQANASFPL TEKLSIAFHY GYSQGDVVED 
LFGDTYADYN VTLSAETDLG TVSFMASDTD LPDNDAKVVL GYSYGFSL