| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3470 |
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| Symbol | |
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| ID | 4280367 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 4129062 |
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| End bp | 4132148 |
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| Gene Length | 3087 bp |
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| Protein Length | 1028 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638136286 |
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| Product | transposase Tn3 family protein |
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| Protein accession | YP_752140 |
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| Protein GI | 114564626 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4644] Transposase and inactivated derivatives, TnpA family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAATG ACGTTCGGCG GCTATCTATT TTGTCAACTG ATGAAATAGA TGAACTGTTT
GGATTACCTC ATTTCTCAGA TGATGATCGT CGATTATATT TTGACTTAAG TGCTAAAGAG
CGCGAGCTAT TCGACAATAC CCGAACGTTT TCTGTGGCAG CCCATTTAGT ATTGCAACTG
GGCTATTTCA AAGCCAAACG GCAGTTTTTC AGTTATGAAC AAGAATCGTC AGTACTAAAT
GACTTGGATT ACATTGCCGC GCTGTACTTT CCCACCAAAA CGCTTTCAAG GCTGAAAAGT
CCCTCAAGAC CGATTAGGGC TGAACAACAA CGAGCAATTC TTGATTTATT CCAGTATAAA
CAATGTGATA ATGAGGTAAA AGTTGATTTG GAAGATAAAG CACAGCGGGT TGCGATGCTA
TCGACACAAC CTATCTTTAT CTTTCGTGAA TTAACCCAAT ACTTAGCATT ACACCGTATT
GTCATGCCCA GTTATCGGTA TATGCAAGAG ATGATTGGTA GAGTGGTGGC TTATGAACGC
ACCCGTATTG CTCGATTACT TAGCACTTGC ATGACTTCAC TTATCGATCA GCAATTAGCG
GCTTTGCTTC GGGCTGATTC AGGAGTATTT CGCGTCAGCG CATTAAAACA TGAAGCTAAA
GATTTCAGTT ATAAAGAATT GCGACATGAA GTCGCACGGC GGCAGTTTTT CCAGCCTCTA
CATGAGTTTG CCAAGCAGTT CCTCATAACA GCGGGGATCT CCAATGAAAG CGGCAAGTAT
TATGCTTCTA TGGTTAAGTT TTATACCACT TATAAACTTC AACGCATGAA AAAAGAGACT
GCTCAGTTAT ATCTGCTGTT TTTTGCTTTT CATCGGTTTC AGCAAATTAA TGACAACTTA
ATTGAAGCAT TGCTCCATTG GGTCGATCAA TACGAGAAAC AGGCCAAGCG TGCCGCTGAA
GAAGCAATGA ATAATGCGGT TACCAATGCA GCGAAAAATT TACAGGCTGC GGGTCATGTA
TTGAGCCTGT TTACGGATGA CACCATCACC GATGACACAC CTTTTTCCAT TATTAAAGAA
AAAGCCTATG CATTGCTTGA ACAAGAGAGA TTCCCATTAG TTGCTGATTA CTTACGCAAT
ATTGCTTTCG ACAAAACGGC ATTTGAATGG TTACATTACA CAAAATTATC CGCCACATTC
AAACGTAACT TAAGGCAACT TTTTACTGAT CTGGATTTTG CCGGACGTGT AGAAGACTCT
CCTTTGCTTG AAGCTATCGG TTTTTTACAA AACTTGTTAC GCACAGAAAA ATCACCAAGG
CAAACTGATC CTAATGCATT TCCGACTGAG ATTATTCCTA AAGGTTTACG CCGATATTTG
TTTAGTAAAG AGGGTAAAAC ATTTAAAACG CTAGATGTAG ATCGCTATGA GTTTTTGGTC
TATCGCCTAC TACGCAACTC ACTGGAAGCG GGTGATGTGT ACGTTAAACA TAGTAATGAA
TTTCGCCGCT TTGAAGATGA CTTAATAAGC GATCTTAGAT GGCAGGATAA AGAACGAGTA
TTGCAAGATA TTGGTGCACC CATTTTATTG GCCCCTATCC AAGATACTCT GGCTGTATTT
CATACTATGC TAGCAGCACG TTATAGTGCG ATTAACCAAC ATATTTCTGA TGGGGTCAAC
AAACATATTA AAGTAATTGG GGCTGCCGAA AAGCGTCGTT GGAAGCTGCT TTATCCGAGC
AGTGATGAAT CCGTTAATAG CGATTTTTAC AGCCAGTTAC CAGGAATTGG TATTGCGGAT
CTACTGTGGT TTGTTGCGGG TAATACTGGA TTTTTAAATG CATTTACCCA TGTATTAGAT
CGTTATGTAA AGCATGAAGC TGATCCCCGT GAAATTTTCG CCTGTATTGT TGCGATGGGA
ACAAACATGG GGTTAGCAAA AATGGCTGAG GTTTCAGGCC TTAGCTCAGC ATCAATGGCG
GGGACGTCTA GAAATTATCT ACGCTTGGAG ACGTTGCGAG CGGCTAATGA TGCGATTAGT
AATGCAACCA GCCAGCTACC CGCATTTCAT CTCTATGATA TTCAGGACTC GCTCCATTCA
AGTAGCGATG GCCAGCGGAT GGAAACGCAA ATTAACACCC TTAACGCTCG ATATTCTCCT
AAGTATTTTG GTTTACAGAA AGGTGTCAGC GCCTACACGT TGGTCGCAAA TCATGTTCCT
ATAAATGCAA AGATTATTGG GACTCACGAA CATGAAAGCC ATTACGTTTT CGATTTATTG
CATAACAATA CCTCTGATAT AAAGCCAGAA CGGCATTCCA CTGACACCCA TGGCACCAAT
CAGGTTAATT TTTGGATTTT GCATGCATTT GGATATCATT TTGCACCTCG TTATCGTGAT
TTGCATAAGA AAATGGATAC GTTAGTCGGC TCACAACATC CCAATGAGTG TGGTGACTGG
CTAATAAAGC CTGCCCGAAA AACCAACGAT GAATTGATTG AACGTGAATG GCCCAATATT
CAACGTATCA TGGCATCGCT AGCTCAAAAA GATGTTACTC AAGCCACGAT TGTTCGCAAA
CTCTCGAGCT ATTCGCGTCA GAATCAGACC AAGAAAGCAT TATGGGAGTT GGAAAACATA
TGCCGAACGC TATACATTCT CGACTTTGTC GACGATGTTG GCTTACGTCA ATGTGTACAA
AAAGCATTAA ATCGTGGTGA AGCCTATCAT CGTCTCAGGC GAGCAGTTGC ATTTGTTAAC
GGTGGAAAAT TCAGAGTAAA AACGGAAGAG GAGCAACAAA TTTGGAATGA ATGCTCTCGG
CTCATCACCA ATGCGGTCAT TTACTACAAC ACAGTGCTGC TATCTCGTGT CTATGAACAG
AAGCAAACAG TAGGAGATCA AAACGCACTG GCTCAGCTTC ACAGTATTTC GCCCGTTGCA
TGGCAGCACA TCAATATGTA TGGCAATTTT GAGTTTAGTC CATCAACCTC AAAAATAGAT
ATCGATGCAT TGGTTGCTCG ATATGCTGAA CCAGAATATT GGAAGCAAGC GCTGATTGAG
AACGAAAATT CAAGTGATGA ATTTTAG
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| Protein sequence | MKNDVRRLSI LSTDEIDELF GLPHFSDDDR RLYFDLSAKE RELFDNTRTF SVAAHLVLQL
GYFKAKRQFF SYEQESSVLN DLDYIAALYF PTKTLSRLKS PSRPIRAEQQ RAILDLFQYK
QCDNEVKVDL EDKAQRVAML STQPIFIFRE LTQYLALHRI VMPSYRYMQE MIGRVVAYER
TRIARLLSTC MTSLIDQQLA ALLRADSGVF RVSALKHEAK DFSYKELRHE VARRQFFQPL
HEFAKQFLIT AGISNESGKY YASMVKFYTT YKLQRMKKET AQLYLLFFAF HRFQQINDNL
IEALLHWVDQ YEKQAKRAAE EAMNNAVTNA AKNLQAAGHV LSLFTDDTIT DDTPFSIIKE
KAYALLEQER FPLVADYLRN IAFDKTAFEW LHYTKLSATF KRNLRQLFTD LDFAGRVEDS
PLLEAIGFLQ NLLRTEKSPR QTDPNAFPTE IIPKGLRRYL FSKEGKTFKT LDVDRYEFLV
YRLLRNSLEA GDVYVKHSNE FRRFEDDLIS DLRWQDKERV LQDIGAPILL APIQDTLAVF
HTMLAARYSA INQHISDGVN KHIKVIGAAE KRRWKLLYPS SDESVNSDFY SQLPGIGIAD
LLWFVAGNTG FLNAFTHVLD RYVKHEADPR EIFACIVAMG TNMGLAKMAE VSGLSSASMA
GTSRNYLRLE TLRAANDAIS NATSQLPAFH LYDIQDSLHS SSDGQRMETQ INTLNARYSP
KYFGLQKGVS AYTLVANHVP INAKIIGTHE HESHYVFDLL HNNTSDIKPE RHSTDTHGTN
QVNFWILHAF GYHFAPRYRD LHKKMDTLVG SQHPNECGDW LIKPARKTND ELIEREWPNI
QRIMASLAQK DVTQATIVRK LSSYSRQNQT KKALWELENI CRTLYILDFV DDVGLRQCVQ
KALNRGEAYH RLRRAVAFVN GGKFRVKTEE EQQIWNECSR LITNAVIYYN TVLLSRVYEQ
KQTVGDQNAL AQLHSISPVA WQHINMYGNF EFSPSTSKID IDALVARYAE PEYWKQALIE
NENSSDEF
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