| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3463 |
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| Symbol | |
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| ID | 4280360 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 4118472 |
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| End bp | 4119551 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638136279 |
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| Product | lipoprotein signal peptidase |
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| Protein accession | YP_752133 |
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| Protein GI | 114564619 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0597] Lipoprotein signal peptidase |
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| TIGRFAM ID | [TIGR00077] lipoprotein signal peptidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCTGGA AATTCTTTCT CTACGACTGG GGTGGTCTGA ACATCGCGTT GTTCCAAGCC
ATCAACATGA GCACACCTGC AGCGCTGGAA CCGCTGGCAT CGTTCTTCAA CCTTGTGATA
GGCAACTACT GGACTGCACC ACTGATGCTC TTGGCGATGT GGGGATGGTC AAAGTCGGCA
CCTGACCCAA CGCGGGCCGA TGCCATCCGG TACAGACTCA GAGTCTTTAG CGTGGCCTTT
GCGTTGGCAT TTCTCGTCGC CACCATCTTG AAGCTATGGA TCGACTTTCC ACGCCCGCCT
GCCGTTTTTG GCGACATGGT GCGCGTTATC GGGGGCATCG AACGACACTA CAGCCTGCCC
AGCGGGCATG CCACCTATGC CGCGCTGGTG GTCGGCGCGC TCTGGCCTTT GATAGGCCGT
CGTGGCCGCA TCGGCTTGGT GTTGTACGCC GCATTGGTCG GTTGGTCACG CATCGCAGCC
GGAATGCACT TTCCTGCCGA TGTGCTGGCG GGGTGGGTAC TTGGATTGAG TTGCACGGCG
CTCGCCGGGT GGCTGATGCC GCTGGCCGCC CCTGTGTGGC AATCGGCTCG CCGCACATCG
ACTTGGGTCT GGTTCGCAGT GGCCGCCAGT GCTGTCATGA CCGATCAGCT CGCAAAGTTC
GCCATCACCC GCACGTTTGC CTACGGTGAA CAGGTCGAAG TCACGCCCTT CTTCAACTTC
GTCCATGTCC TGAATCCCGG CGCGGCATTC AGCTTTCTGG CGAACGCTGG CGGCTGGCAA
CGTTACTTTT TCATCACGCT GGGCCTGGTC GTTTCTGCTT GGCTGGGACG CATGCTGTGC
CAGCAATTGC CCCGTCTCGA AGCGATGGGA TACAGCCTGA TCCTCGGCGG TGCGCTGGGC
AATGTCGCGG ATCGTGTGCT GCGTGGACAG GTTGTTGATT TCCTTGACTT CCATTGGCGA
CTTGCGCACT GGCCCGCCTT CAACCTCGCT GATGTGGCGA TAACTATCGG AGCGCTCTGC
CTGTTCTTGA CGGTTGTACC GAAAAGCAGT AAAGGCACAG AGGCCGAGGT GTCCGGTTAA
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| Protein sequence | MSWKFFLYDW GGLNIALFQA INMSTPAALE PLASFFNLVI GNYWTAPLML LAMWGWSKSA
PDPTRADAIR YRLRVFSVAF ALAFLVATIL KLWIDFPRPP AVFGDMVRVI GGIERHYSLP
SGHATYAALV VGALWPLIGR RGRIGLVLYA ALVGWSRIAA GMHFPADVLA GWVLGLSCTA
LAGWLMPLAA PVWQSARRTS TWVWFAVAAS AVMTDQLAKF AITRTFAYGE QVEVTPFFNF
VHVLNPGAAF SFLANAGGWQ RYFFITLGLV VSAWLGRMLC QQLPRLEAMG YSLILGGALG
NVADRVLRGQ VVDFLDFHWR LAHWPAFNLA DVAITIGALC LFLTVVPKSS KGTEAEVSG
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