Gene Sfri_3461 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_3461 
Symbol 
ID4280358 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand- 
Start bp4115544 
End bp4115984 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content56% 
IMG OID638136277 
Producttranscriptional regulator, MerR family protein 
Protein accessionYP_752131 
Protein GI114564617 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID[TIGR02047] Cd(II)/Pb(II)-responsive transcriptional regulator 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAATCA GAATTGGCGA CCTCGCCAAG CGCTCTGGGT GCGAGGTCGT GACCATCCGC 
TACTACGAGA AGGAAGGGCT ACTGCCGAAG CCAGCGCGAA GCGGTGGCAA CTTCCGGCTG 
TACGGTGAGG CGCACATTGA GCGCTTGCAA TTCATCCGTC ATTGCCGTTC GCTCGAGATG 
ACGTTGAGCG AGATTCGCGC ATTGCTGGGT CTGCGAGACA ACCCGATGCA GGACTGTGGG 
GAGGTCAACA CGCTGCTGGA GGCCCATATT CAACAGGTGG AAATGCGTGT GTCCGCGCTG 
TTGCAGTTAA AACGGCACTT GGTTGATTTG CGCGAGAAGT GTTCTGGCTC TCGATCTGTA 
GAGGCGTGCG GCATTTTGCA AGGGTTGGGC AATTGCAATT GCCATGGTGA AAGTGCCACG 
AACAGTCAAA CATCTGGGTA A
 
Protein sequence
MEIRIGDLAK RSGCEVVTIR YYEKEGLLPK PARSGGNFRL YGEAHIERLQ FIRHCRSLEM 
TLSEIRALLG LRDNPMQDCG EVNTLLEAHI QQVEMRVSAL LQLKRHLVDL REKCSGSRSV 
EACGILQGLG NCNCHGESAT NSQTSG