| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3451 |
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| Symbol | |
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| ID | 4280348 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 4104163 |
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| End bp | 4104909 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638136267 |
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| Product | integrase catalytic subunit |
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| Protein accession | YP_752121 |
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| Protein GI | 114564607 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2801] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000348389 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGTTTGGAC TCAGTGAGAG CTGTTATCGC TATCAGGCAA AACTCAGTGA TGAAAACGCT
GCAATAGCCG ACTGGTTACA GCAACTGACA TCAACCCATC GGAGTTGGGG GTTTGGGCTA
TGTTATTACT TTTTACGTAA CGTGAAACGC TACCGATGGA ACCATAAGCG GGTGTATAGG
ATTTACCGAG AATTGGAGCT AAATCTACGA ATTAAGCCGA GGAAACGCTT GAAGCGTGAT
AAACCGGACA CATTGGCGGT GCCAGAGGCA ATCAATGAAT GTTGGTCCAT GGACTTTATG
CACGACCAAC TGGAAGATGG TCGCAGCATT AGGTTATTGA ACGTGATTGA TGATTACAAC
CGTGAAGGCT TGGCGATAGA AGTCGACTTC TCCTTACCTG CGGAGCGTGT GGTGAGAACA
TTGGATCAAA TCATCGAATG GCGTGGAAAA CCAAAACAGA TACGCAGTGA TAATGGTCCA
GAGTATATAA GTGCGGTACT GGCTGCCTGG GCTGAAAAAC ACAATGTAGA ACTGAAATTT
ATTCAGCCTG GCAATCCACA GCAGAATGCC TATGTAGAAC GCTATAATCG GACTGTGCGA
TACGAATGGC TGAGCCAATA TCTTTGGAAT AGTATTGCCG AGGTACAGGA ACATGCGACA
CAATGGCTAT GGTTTTATAA CAATGAAAGA CCCAATACAG CAATTGGTGG TGTCCCACCA
AAGCAAAAAC TGGCACTAGT GGCCTAA
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| Protein sequence | MFGLSESCYR YQAKLSDENA AIADWLQQLT STHRSWGFGL CYYFLRNVKR YRWNHKRVYR
IYRELELNLR IKPRKRLKRD KPDTLAVPEA INECWSMDFM HDQLEDGRSI RLLNVIDDYN
REGLAIEVDF SLPAERVVRT LDQIIEWRGK PKQIRSDNGP EYISAVLAAW AEKHNVELKF
IQPGNPQQNA YVERYNRTVR YEWLSQYLWN SIAEVQEHAT QWLWFYNNER PNTAIGGVPP
KQKLALVA
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