| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3403 |
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| Symbol | |
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| ID | 4280305 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 4052300 |
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| End bp | 4053058 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638136224 |
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| Product | uridine phosphorylase |
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| Protein accession | YP_752078 |
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| Protein GI | 114564564 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG2820] Uridine phosphorylase |
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| TIGRFAM ID | [TIGR01718] uridine phosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCCGATG TATTTCACTT AGGATTAACT AAAAAAATGT TAGATGGCGC TACCTTAGCA
ATCGTTCCTG GTGATCCAGA GCGTGTTAAG CGTATTGCTG AGCTAATGGA CAACGCAACG
TTCTTAGCGA GCCATCGTGA ATACACAAGC TACTTAGCTT ATATCGATGG CAAAGCCGTG
GTTGTTTGTT CAACTGGTAT CGGTGGACCA TCAACTTCTA TTGCGGTTGA AGAATTAGCA
CAATTAGGTG TGAGAACTTT CTTACGCGTA GGTACAACTG GCGCAATCCA ACCGCACGTA
AACGTGGGTG ATGTGATTGT GACTCAAGCT TCTGTGCGTT TAGATGGCGC AAGCTTACAC
TTTGCACCGC TTGAGTTCCC AGCAGCAGCA GACTTTGAAT GTACCACTGC TATGGTTGCA
GCTTGTCGTG ACGCTGGTTT AGAGCCGCAC ATTGGTATTA CTGCTTCTTC TGACACTTTC
TATCCAGGTC AAGAGCGTTA CGATACTGTT TCTGGTCGCA TTACTCAGCG TTATGTTGGC
TCTATGAAAG AGTGGCAGTC AATGGGTGTG CTGAACTATG AAATGGAATC AGCTACGCTA
TTTACAATGT GTGCAACTCA AGGTTGGCGT GCAGCATGTG TTGCCGGTGT TATTGTAAAC
CGCACACAGC AAGAGATCCC TGATGAAGCG ACAATGAAGA AGACTGAAGT AAGTGCAGTG
TCTATTGTTG TAGCAGCAGC GAAAAAATTG TTAGCTTAA
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| Protein sequence | MSDVFHLGLT KKMLDGATLA IVPGDPERVK RIAELMDNAT FLASHREYTS YLAYIDGKAV
VVCSTGIGGP STSIAVEELA QLGVRTFLRV GTTGAIQPHV NVGDVIVTQA SVRLDGASLH
FAPLEFPAAA DFECTTAMVA ACRDAGLEPH IGITASSDTF YPGQERYDTV SGRITQRYVG
SMKEWQSMGV LNYEMESATL FTMCATQGWR AACVAGVIVN RTQQEIPDEA TMKKTEVSAV
SIVVAAAKKL LA
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