Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_3400 |
Symbol | |
ID | 4280302 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 4049265 |
End bp | 4050194 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638136221 |
Product | band 7 protein |
Protein accession | YP_752075 |
Protein GI | 114564561 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTTGTGT TAACAATCGT TTTTTTATTT GTAATGTTTA TTTTGTTCAA ACTCATGTTA ATTGTGCCAA TGCGTGAAGT GCATGTTATT GAGCGTTTGG GTAAGTTTCG TACCGTGCTA GAGCCAGGGT TTCATTTTCT TGTCCCTTTT GTCGATCGGG TTGCTTATCG CCACGACACT CGTGAAGAAG TATTAGATGT GCCACCGCAA AGCTGTATTT CAAAAGATAA CACCCAATTG GAAGTTGACG GTTTAGTTTA CCTTAAGGTG ATGGACGGCA AGCTTGCCAG CTATGGTATT GAAAATTATC GCCGTGCAGC GGTTAACTTA GCGCAAACAA CCATGCGTTC TGAAATTGGT AAGCTAACTT TGTCGCAAAC GTTTTCTGAG CGTGACAGTT TGAATGAATC CATTGTGCGT GAAATTGATA AAGCCTCAGA TCCTTGGGGG ATCAAAGTAT TACGTTATGA GATTAAAAAT ATCTCGCCTT CAATGAAGGT TATTCACACC CTTGAAAAAC AAATGGAAGC AGAACGCCGT AAGCGTGCTG AAATCACGTT AGCGAATGCT GAAAAAGCTG CAATGATCAA TATGTCGCAA GGTGAACGTC AAGAAGCGAT TAATTTATCT GAAGGTCAAA AACAAAAGCG TATTAACGAG GCTTTAGGTA CAGGGCAAGA AATTTCCATT ATTGCTAACG CGAAAGCTGA AGGCATGGAA ATGATCTGCA AAGCCTTAAC AGTAAATGGC GGCGATGACG CTATGAACAT GTTACTTAAA GAACAGTTTA TTGGCCAAGT GGGCAAAATT TTATCTGAAG CTCAAGTTTC TGTTGTGCCA GCGGAAATGG CCAAGCTAGA AGGCTTTTTT GAAGGTATGG AGCAAGTGAC TCATGCCGTA TCAAACTCAT CAGCAAAAGG AGCACGCTAA
|
Protein sequence | MFVLTIVFLF VMFILFKLML IVPMREVHVI ERLGKFRTVL EPGFHFLVPF VDRVAYRHDT REEVLDVPPQ SCISKDNTQL EVDGLVYLKV MDGKLASYGI ENYRRAAVNL AQTTMRSEIG KLTLSQTFSE RDSLNESIVR EIDKASDPWG IKVLRYEIKN ISPSMKVIHT LEKQMEAERR KRAEITLANA EKAAMINMSQ GERQEAINLS EGQKQKRINE ALGTGQEISI IANAKAEGME MICKALTVNG GDDAMNMLLK EQFIGQVGKI LSEAQVSVVP AEMAKLEGFF EGMEQVTHAV SNSSAKGAR
|
| |