Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_3379 |
Symbol | |
ID | 4280281 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 4024838 |
End bp | 4025281 |
Gene Length | 444 bp |
Protein Length | 147 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638136200 |
Product | PTS IIA-like nitrogen-regulatory protein PtsN |
Protein accession | YP_752054 |
Protein GI | 114564540 |
COG category | [G] Carbohydrate transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) |
TIGRFAM ID | [TIGR01419] PTS IIA-like nitrogen-regulatory protein PtsN |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.655095 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAACTTT GTACCATTCT GCAGCCGGAA TGCACTACCT GTGCCACACC GGGCAGTAAG AAAAAAGTAC TGGAACTCAT CAGCAATTTA GTCGCTGCCC AGTACCCAAC CCTGTCTTCG CAAGAGGTTT TTGAAAGCCT GTTAGCGAGA GAGAAAATGG GTAGCACAGG TATAGGAAAT GGCATTGCGA TACCTCATGG TCGATTAACG ACCATCGATC ACCCTATCGC GATATTTATT AAATGTGAAG AAGCCATTGC CTTTGATGCA ATCGATAAAC AGCCCGTGGA TCTTTTATTT GCTTTGTTAG TACCTGCCGA CCAGTGCCAA CAACATTTAG GCACGTTATC AAGCATGGCC CAAAAGTTAA GCGATAAGCA AATATTGAAA CAGCTTCGCA AAACTCACGA CGCAACAGAA CTTTATCAGG TTATTACTGC ATGA
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Protein sequence | MELCTILQPE CTTCATPGSK KKVLELISNL VAAQYPTLSS QEVFESLLAR EKMGSTGIGN GIAIPHGRLT TIDHPIAIFI KCEEAIAFDA IDKQPVDLLF ALLVPADQCQ QHLGTLSSMA QKLSDKQILK QLRKTHDATE LYQVITA
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