| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3370 |
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| Symbol | |
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| ID | 4280272 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 4017487 |
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| End bp | 4018311 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638136191 |
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| Product | ABC transporter related |
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| Protein accession | YP_752045 |
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| Protein GI | 114564531 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1127] ABC-type transport system involved in resistance to organic solvents, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.839994 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGATA TGAGCAAATC AAGTAATAAA CCTCTGGTAG AAGTTAACCA TTTAGCGTTT
AGCCATGGTT CACGCGTGAT TTATGAAGAT ATTTCTTTAT CGATCCCAAA AGGTAAAGTA
ACAGCAATCA TGGGGCCCAG TGGTATCGGT AAAACCACCT TGTTGAAATT GATTGGCGGA
CAGTTAACCC CCAGCAGTGG GCAAGTCCTA TTTGATGGCC ATGATATACA CAAGCTTAAA
CGCAAAGATC TATTTGAATT GCGTAAGCGC ATGAGTATGC TATTTCAAAG TGGTGCAATG
TTTACCGACC TTAATGTTTT CGATAATGTT GCGTTTGCAT TAAGAGAACA TTCTGGATTG
CCTGAAGATA TTATTCGCAC CATTGTATTG ATGAAGCTTC AAGCTGTCGG ACTTCGTGGC
GCTGCATATA TGATGCCTAA CGAGTTATCT GGTGGTATGC AACGTCGCGC TGCATTGGCA
CGAGCGATTG CACTAGAACC AGAGATGGTA CTGTACGATG AGCCCTTTGC CGGACAAGAT
CCTATTTCAA TGGGCATGCT CGTAAAACTT ATTCGTGAGT TGTCGGATTC ATTAAAACTC
ACTTCAGTAG TGGTTTCTCA CGATGTAGAT GAAGTATTAG GTATTGCAGA TTATGTCTAC
GTAATAGCAG ACAAAAAAGT GATTGCACAT GGTACTCCAG AGCAATTACG TCAATCTGAC
AATCCACAAT TGGTTCAGTT TATTCAAGGT GCACCAGATG GCCCTGTGCC ATTTCATTAT
CCTGCTGAGG ATTATCAAGA GGAGCTACTT CGTGGGTGCA ATTGA
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| Protein sequence | MSDMSKSSNK PLVEVNHLAF SHGSRVIYED ISLSIPKGKV TAIMGPSGIG KTTLLKLIGG
QLTPSSGQVL FDGHDIHKLK RKDLFELRKR MSMLFQSGAM FTDLNVFDNV AFALREHSGL
PEDIIRTIVL MKLQAVGLRG AAYMMPNELS GGMQRRAALA RAIALEPEMV LYDEPFAGQD
PISMGMLVKL IRELSDSLKL TSVVVSHDVD EVLGIADYVY VIADKKVIAH GTPEQLRQSD
NPQLVQFIQG APDGPVPFHY PAEDYQEELL RGCN
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