Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_3367 |
Symbol | |
ID | 4280269 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 4015521 |
End bp | 4016189 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 638136188 |
Product | toluene tolerance family protein |
Protein accession | YP_752042 |
Protein GI | 114564528 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG2854] ABC-type transport system involved in resistance to organic solvents, auxiliary component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.18441 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACAT TTTTTAGTTG TGTTATAGCT TTATGCCTAG TTGGCAGTGC CGTTATCAGT CAAGGTGCTA CGGCTGCTAA TGATGAGGTG AACACGAGTG ATCCTTATGA GATGATCAAA CAAGTCGCCA ATATGACCTT TGATCGGTTT AAATCAGATA AAGAATTAAT TAATGCCGAT TTAGGTCACT TAAAAGTGAT TGTACGTGAA GAGCTTATGC CTTACGTCGA TTATAAATAT GCTGCATATA AAGTTATGGG CCAGTATTTA AGTGATACAA CCGTTGATCA ACGTAATCGT TTTGTTGAGG CTTTTGAAGG CTATTTAGTT GCCACTTATG CTCAAGCATT AACAGAATAT ACCGATCAAA AAGTCGCATT TGATCCACCG AGTGATTTTA GCGATGAAAA AATAGTTGAA GTGAACGTGC AGATTATCGA AAAAGGTCGT CCACCGATTA AAATTCAATT TAAAGCGCGT CGTTTGAAAG ACAACACTTG GAAAGCATTT GATTTAGTGG CGGAAGGCGT GAGCTTACTC GCCTCTAAAC AGTCTGAAAT TTCTAATTTA ATCCGTCAGC AAGGTATTGA AGCGGTGATT ACAATGTTGA ATGATAAAAC TCAACAGACT ATTGATCGCC AACCAGCAAA AGAAGCTGCA GCTGCGTGA
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Protein sequence | MKTFFSCVIA LCLVGSAVIS QGATAANDEV NTSDPYEMIK QVANMTFDRF KSDKELINAD LGHLKVIVRE ELMPYVDYKY AAYKVMGQYL SDTTVDQRNR FVEAFEGYLV ATYAQALTEY TDQKVAFDPP SDFSDEKIVE VNVQIIEKGR PPIKIQFKAR RLKDNTWKAF DLVAEGVSLL ASKQSEISNL IRQQGIEAVI TMLNDKTQQT IDRQPAKEAA AA
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