Gene Sfri_3357 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_3357 
Symbol 
ID4280259 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp4006494 
End bp4007789 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content42% 
IMG OID638136178 
Productadenylosuccinate synthetase 
Protein accessionYP_752032 
Protein GI114564518 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0104] Adenylosuccinate synthase 
TIGRFAM ID[TIGR00184] adenylosuccinate synthase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0113184 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCAAAA ATGTAGTCGT ACTCGGCACT CAATGGGGTG ACGAAGGCAA AGGTAAGATT 
GTCGACCTTT TAACAGAACA GGCAAAATAC GTAGTTCGTT ACCAAGGCGG CCATAATGCC
GGTCATACTT TGGTAATTGA TGGTGAAAAA ACCGTTCTTC ATCTTATTCC GTCAGGCATT
TTACGTGATA ACGTAAAATG TATTATCGGT AATGGTGTGG TTGTTGCTCC TGATGCGTTG
ATGAAAGAAA TCAACATGCT AAAAGGACGC GGCGTACCTG TCGAAGAGCG TTTATTAATT
TCTGAAGCAT GTCCGCTTAT CCTTCCATTC CATTGTGCAT TGGATATTGC TCGCGAGAAA
GCTCGCGGTA ATCAAGCCAT TGGTACAACG GGTCGTGGTA TTGGTCCTGC ATATGAAGAC
AAAGTATCTC GTCGCGGTTT ACGCATCGGT GATTTGTTTA ATGCAGAACT TTTTGCGACT
AAGTTACAAG AAGTGATGAA ATATCATAAC TTCATGCTAA CTGAGTACTA CAAAGTTGAA
GCCGTTGATT ATCAGCAAAC ACTTGATGAT GCATTAGCGA TTGCTGATTA TCTAAAAAGC
ATGTGTACTG ATGTTAGTGA AATGCTTGAT GTTGCGCGTA AAGCGGGTGA GCCAATTTTG
TTTGAAGGCG CTCAAGGCAC ATTATTGGAT ATCGACCACG GTACTTATCC ATTTGTGACT
TCATCAAACA CGACAGCTGG TGGTGTTGCG ACTGGTTCAG GTTTTGGTCC TCGTCATTTA
GACTATGTTT TAGGCATCAT GAAAGCTTAT ACGACTCGCG TCGGTGCTGG TCCATTCCCA
ACAGAATTAG CCAATGAAAT TGGTGATTAT ATTGGTGAGA AAGGCCAAGA GTTTGGTGCA
ACAACTGGTC GTAAGCGTCG TCCTGGTTGG TTGGATGCTG TGGCAATGCG CCGCGCAGTT
CAAATCAACA GCGTTAGTGG TTTTTGTTTA ACTAAATTAG ACGTTTTAGA CGGCCTAAAA
GAAGTTAAAA TTTGTGTTGG CTATCAATAT GCTGATGGAA CAGTTTCAAA GGTTACGCCT
TTGGCTGCAG AAGGATATGA TTTAGTTACC CCAATATATG AAACCATGCC TGGTTGGAGT
GAAACCACTT TTGGTGCCAC AACAATCGAG CAATTGCCTC CAGCGGCAAT AAATTATATC
AAGCGTCTCG AAGAGTTATT AGAAACGCCT ATTGATATTA TCTCTACTGG GCCGGACAGA
AATGAAACCA TGATTCTGGT TAATCCGTTC AAGTAA
 
Protein sequence
MGKNVVVLGT QWGDEGKGKI VDLLTEQAKY VVRYQGGHNA GHTLVIDGEK TVLHLIPSGI 
LRDNVKCIIG NGVVVAPDAL MKEINMLKGR GVPVEERLLI SEACPLILPF HCALDIAREK
ARGNQAIGTT GRGIGPAYED KVSRRGLRIG DLFNAELFAT KLQEVMKYHN FMLTEYYKVE
AVDYQQTLDD ALAIADYLKS MCTDVSEMLD VARKAGEPIL FEGAQGTLLD IDHGTYPFVT
SSNTTAGGVA TGSGFGPRHL DYVLGIMKAY TTRVGAGPFP TELANEIGDY IGEKGQEFGA
TTGRKRRPGW LDAVAMRRAV QINSVSGFCL TKLDVLDGLK EVKICVGYQY ADGTVSKVTP
LAAEGYDLVT PIYETMPGWS ETTFGATTIE QLPPAAINYI KRLEELLETP IDIISTGPDR
NETMILVNPF K