Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_3349 |
Symbol | rpsR |
ID | 4280251 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 3998862 |
End bp | 3999089 |
Gene Length | 228 bp |
Protein Length | 75 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638136170 |
Product | 30S ribosomal protein S18 |
Protein accession | YP_752024 |
Protein GI | 114564510 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0238] Ribosomal protein S18 |
TIGRFAM ID | [TIGR00165] ribosomal protein S18 |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000024458 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCACGTT ATTTCCGTCG TCGCAAGTTC TGCCGCTTCA CCTCTGAAGG TGTTGTCGAG ATTGATTACA AAGATATCGT TACTTTAAAG AACTACATCA CTGAAAGCGG CAAGATTGTT CCTAGCCGTA TCACTGGTAC CAGTGCTAGA TATCAACGCC AACTAGCTCG CGCTATCAAG CGTGCTCGTT ATCTTTCTCT ACTGCCATAT ACTGATTTAC ATCAGTAA
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Protein sequence | MARYFRRRKF CRFTSEGVVE IDYKDIVTLK NYITESGKIV PSRITGTSAR YQRQLARAIK RARYLSLLPY TDLHQ
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