| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3320 |
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| Symbol | |
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| ID | 4280222 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 3966361 |
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| End bp | 3967233 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638136141 |
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| Product | hypothetical protein |
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| Protein accession | YP_751995 |
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| Protein GI | 114564481 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5006] Predicted permease, DMT superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000781586 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACCAA CTAAACCACA CACTGGCTTA GTTGAGTTAC ATTTAGCCGT ACTGCTCTTT
GGTGGTACGG CTTTATTTTC TAAACTAATT CCCCTTAGCG CACTTAACAT TACCTTTTTG
CGCTGTATCA TCGCCGCAAT GGTACTCGCA GCAATTATCA AAGCGGCCAA ACGCCCACTT
AGGTTACAAC GCCAACAAGA TTATTGGGCG GCCTTAGCGT TAGGTACTCT AGTGTGTTTG
CATTGGGTAA CGTATTTTGC GGCTATGCAG TTGTCATCTG TCGCCATTGG TATGATTGCT
TTTTTTACTT ATCCGGTCAT GACGGTATTA ATCGAACCAT TAATCAATAA AACTCAGCTA
AAACCTGTCG ATGTGATATC CGCTATCGCG GTATTAGCAG GAGTAATAAT GCTGATCCCT
GAGGCTAATC TGAATAATGA CACCACCTTA GGCATTATCG TTGTCATTAT TTCAGCAGCT
TTATTTACCA GCAGAAATTT ACTTCATAAA CGAGTATTTT CGCAATATAG CGGTCCGCAT
GCTATGTTTT ACCAAACACT GATAACCTTA ATTCTATTGA GTCCATGGCA AGATGTTGCG
GCCCAGCACA TTAGCCAAAC CACTTGGGGA TTGATTCTGT TACTTGGCAT CGTTTTCACC
GCCTTACCTC ATGCGTTATT TACTACAGCA CTGCGTTTTT TAAGCGCGAA AACGGTGGGG
TTAGTGTCGT GTTTACAGCC GTTTTATGGT GCAGTGCTCG CATTGTTGAT TTTAGACGAG
CAACTCACAA CACCAACCCT TATCGGCGGA ACCATTATTG TGGCAACGGC TTTATTTGAA
ACCCAACAAA GTCATCAAAA AAGTAGAGCA TAA
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| Protein sequence | MTPTKPHTGL VELHLAVLLF GGTALFSKLI PLSALNITFL RCIIAAMVLA AIIKAAKRPL
RLQRQQDYWA ALALGTLVCL HWVTYFAAMQ LSSVAIGMIA FFTYPVMTVL IEPLINKTQL
KPVDVISAIA VLAGVIMLIP EANLNNDTTL GIIVVIISAA LFTSRNLLHK RVFSQYSGPH
AMFYQTLITL ILLSPWQDVA AQHISQTTWG LILLLGIVFT ALPHALFTTA LRFLSAKTVG
LVSCLQPFYG AVLALLILDE QLTTPTLIGG TIIVATALFE TQQSHQKSRA
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