Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_3301 |
Symbol | |
ID | 4280203 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 3946077 |
End bp | 3948566 |
Gene Length | 2490 bp |
Protein Length | 829 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638136119 |
Product | peptidase S9 prolyl oligopeptidase |
Protein accession | YP_751976 |
Protein GI | 114564462 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAAGCT TTATGCGAAA CTTTGCGGTG AGCGCACTTT CTTTGGCAAT GATAAGTGGT TGTGCTGCCA CGGCCAAACA TGACGATACA ATGGTTATCG CAGCGCCGAG TGCAACAACG TTGACCGTGC CATTAGCACA GCCTCCAAAA GCCCAGCAAC CGTTGACACT TAATCAAATT ATGGCCAATC CAGATTGGAT GGGAATTTTT GCTCAAGGAG CTTATTGGAG CGATGACAGT CAATCGGTAT ATTTCAGTCG CCAAGCACAT CAATCTCCGG TCCGTGATTT TTATCAACAA GCTATTGGAC AGTCCGAGGC AAACAAGCTT GCACTTAATC AGTTGCACCT TGCCGATCAA CGTAATGGTG TCTTCGATCA GGCCAAGACT CAAAAAGCCT ATATTTATCA AGGTAACGTA TTTGTAAAAG ATTTATCAAA CGGTGAAATA AAGCAATTTA CCCGTCAAAA CGATGCAATT AATGGCGTAC GTTTTTTAAA TGGTGGCGAC CTTGCATTCT GGCAAGGTAA TAATATTTTC CGAGTGCACC AGTCTAGCGG CCTAGTAGAA CAAATTGCCG CAATCCAAAT GGAAAACGAA CCTAAAACGA CGCAACAGCC AAGCAGCTTT ATTGCTAAGC AACAGCATAG ACTTATTCAA TATGTTGCCA TGGAACATGA CAACAGTGTC ACACGTGATG AATACCGAGA TTCATTGGCT AAAGCCGATC CTACTTTTTC AGCTAAACCT TGGTATTTAG GTGATGCTGA AGTGGTTTCA GAAATGAGCC TGTCGCCTGA TGGACGTTAT GTGATATTGG CCTTAACGGA CAAAAATTAT GATTGGCGTG CAGAACACGA CATTATGCCG AATTATTTGG GCCAAGAAGG TTATGTCGAT CCTGTGCCAG CACGTTCACG TGTTGCAGAA GACGCTTTTC CAGGTCAACG TTTAGTGCTA CTCGACCTTA TTGAACACAA TAAAAAAGAC ATTACCATCG AAGGTCTAAC TGGTTTTGAT CAAGACGTAT TGGCGAGTGT CAAAACTGAA AATGCTAAGG CCCAAGGCAA AAGCTATAAA AGCGAAAATG CTCCGCGTTT AGTCCAGTTA ATGCAAGATT GGGAGTGGAG CCAAAGCGCA ATTCAGTGGC ATGAGTCTGA TGATAAATTA TTAGTGATGC TGGAAGCCGT TGACAACAAA GATCGCTGGA TCGCCAGTGT CGACCTTCAA AAAGGCAAAC TAACAACCGA ACATCGGTTA CATGACGATG CTTGGGTAAA CTATAATTTT AATCAATTTG GGTGGATAAC CGGTACCGAT AACATGTACT ACTTATCTGA AGAGTCTGGT TTTTCTCAGC TCTATACTAA AACGGCAGCT GGCAAAGTAG TCGCTCTTAC CAATGGCAAA TTTGTGGTTG ATAATGTGAC GTTATCACCC GACGCAAAAC ACCTTTATTA TCGTGCTAAT AAAGACCATC CAGGTAGCTA CAATGTTTAC CGTGTTGAGA TTGCCACAGG TAAAACAGAG CAACTGACTC AGTGGCTGGG CACATTGGAT TACAATTTGA GCCCTGATGG ACAATCATTG TTACTAACGG CTTCATCTGC TGTTCACCCT GATGAACTGT ACATTCAACC TATTGGCGGA AAAATGAGCC AATTAACGCA TTATACTAGC CCTGAATTTA CACTATATCC TTGGCAAACA CCGCAGATAG TGACGGTTCC TTCAAGCCAT GGGGCGGGAA ACATTTATGC GCGGGTTTAT TTGCCTCAAG GTTATGATGC TACCCAAGCA GACAAATATC CTGCTGTAGT GTTTAACCAT GGTGCTGGAT ATTTACAAAA TGCTCATTAT GGTTTCTCGG GGTATTTTCG TGAGTTCATG TTCCATAACC TCCTAACCCA ACAAGGTTAT GTAGTGATGG ACATGGATTA CCGTGGTTCA AAAGGTTATG GCCGTGATTG GCGAACCGCG GTGTATCGCA ACATGGGGCA TCCTGAAGTT GAAGATTTAA AAGATGGTGT AGCATGGATG GCAAGTAATG CTAACGTGGA TGCACAGCGT GTGGGCACTT ATGGTGGTTC GTACGGTGGT TTCCTTACCT TTATGGCGTT ATTCAATGAG CCTGAGTTGT TCCAAGCAGG AGCCGCATTG CGCCCTGTAG CTGATTGGGC ACATTATAAT GCACCTTATA CCTCTAATAT TTTAAATACG CCTGACGTCG ATCCTATCGC TTATGAGCGT AGCTCACCAA TAGAGCATGC TCAGGGGTTA CAGAAACCAC TATTGATCAT GAGTGGTGTG TTAGATGACA ACGTGTTTTT CCAAGACAGT GTGCGCATGG TGCAACGGCT TATTGAATTA GAAAAGCCGA TGTTTGAAAC CGCAATCTAT CCTGTCGAAC CGCATGGATT TAAGCAACCT TCAAGTTGGT TAGATCAGTA TCGTCGTATT TATAAACTGT TTGAACAAGA ATTGAAGTAA
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Protein sequence | MTSFMRNFAV SALSLAMISG CAATAKHDDT MVIAAPSATT LTVPLAQPPK AQQPLTLNQI MANPDWMGIF AQGAYWSDDS QSVYFSRQAH QSPVRDFYQQ AIGQSEANKL ALNQLHLADQ RNGVFDQAKT QKAYIYQGNV FVKDLSNGEI KQFTRQNDAI NGVRFLNGGD LAFWQGNNIF RVHQSSGLVE QIAAIQMENE PKTTQQPSSF IAKQQHRLIQ YVAMEHDNSV TRDEYRDSLA KADPTFSAKP WYLGDAEVVS EMSLSPDGRY VILALTDKNY DWRAEHDIMP NYLGQEGYVD PVPARSRVAE DAFPGQRLVL LDLIEHNKKD ITIEGLTGFD QDVLASVKTE NAKAQGKSYK SENAPRLVQL MQDWEWSQSA IQWHESDDKL LVMLEAVDNK DRWIASVDLQ KGKLTTEHRL HDDAWVNYNF NQFGWITGTD NMYYLSEESG FSQLYTKTAA GKVVALTNGK FVVDNVTLSP DAKHLYYRAN KDHPGSYNVY RVEIATGKTE QLTQWLGTLD YNLSPDGQSL LLTASSAVHP DELYIQPIGG KMSQLTHYTS PEFTLYPWQT PQIVTVPSSH GAGNIYARVY LPQGYDATQA DKYPAVVFNH GAGYLQNAHY GFSGYFREFM FHNLLTQQGY VVMDMDYRGS KGYGRDWRTA VYRNMGHPEV EDLKDGVAWM ASNANVDAQR VGTYGGSYGG FLTFMALFNE PELFQAGAAL RPVADWAHYN APYTSNILNT PDVDPIAYER SSPIEHAQGL QKPLLIMSGV LDDNVFFQDS VRMVQRLIEL EKPMFETAIY PVEPHGFKQP SSWLDQYRRI YKLFEQELK
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