Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_3290 |
Symbol | |
ID | 4280192 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 3934409 |
End bp | 3935305 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638136108 |
Product | phosphoribulokinase |
Protein accession | YP_751965 |
Protein GI | 114564451 |
COG category | [C] Energy production and conversion |
COG ID | [COG3954] Phosphoribulokinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.803958 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAGCAA AACATCCTAT TATTGCTGTA ACCGGTTCAT CCGGTGCTGG CACAACTACG ACCACAACTG CCTTCATTCA TATTTTTAGA CAGTTGGGTA TCAATGCTGC ATTCGTTGAA GGGGATAGTT TCCATAATTT CACCCGCGCT GAAATGGAAG TGTTAATTAG AAAATCACAG GCTGAAAATC GAAACTTAAG CTATTTTGGT CCCGAAGCGA ATAATTTCAA AAAGCTCGAA GAATGTTTTA CCAGTTATGG TGATACAGGT AATGGCCAAA CCCGCAGCTA CTTACACACC TTTGATGAAG CGGTGCCATT TAATCAAATG CCCGGTACAT TTACGCAATG GCGTGATTTG CCAGCCAATA CCGATATGCT GTATTACGAA GGACTGCACG GTGGTGTGGT AACGGAAGAT GCCGATGTCG CTAAACATGT TGATCTTTTG ATAGGCATGG TGCCGATTGT TAACTTAGAG TGGATCCAGA AGATTATTCG CGACACAAAT GATAGAGGCC ATAGTCGTGA AAAAGTCATG GGCTCAATAG TCCGTAGTAT GGACGATTAC ATCAAGCACA TGACGCCACA ATTTTCACGG ACACACATTA ATTTTCAACG AGTGCCGACT GTAGACACCT CGAACCCTTT TAGCGCAAAA GACATACCAA GCTTAGATGA AAGCTTTTTA GTTATTCGCT TTCGCGGTAT TAATAATGTT GATTTCCCTT ATTACCTCAA CATGATCCAA GGCTCATTTA TGTCACGCGT CAATACACTA GTTGTTCCTG GTGGAAAAAT GTCTCTGGCT ATGGAATTAA TTTTAACGCC TTTGGTTAAA GACTTAATGG ATAAACGTCT AGAGTTGCAA AACCTTGATG ATATCAAACT CGATTAA
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Protein sequence | MSAKHPIIAV TGSSGAGTTT TTTAFIHIFR QLGINAAFVE GDSFHNFTRA EMEVLIRKSQ AENRNLSYFG PEANNFKKLE ECFTSYGDTG NGQTRSYLHT FDEAVPFNQM PGTFTQWRDL PANTDMLYYE GLHGGVVTED ADVAKHVDLL IGMVPIVNLE WIQKIIRDTN DRGHSREKVM GSIVRSMDDY IKHMTPQFSR THINFQRVPT VDTSNPFSAK DIPSLDESFL VIRFRGINNV DFPYYLNMIQ GSFMSRVNTL VVPGGKMSLA MELILTPLVK DLMDKRLELQ NLDDIKLD
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