Gene Sfri_3132 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_3132 
Symbol 
ID4280035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp3749009 
End bp3750160 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content38% 
IMG OID638135951 
Productlipase, class 3 
Protein accessionYP_751808 
Protein GI114564294 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.95393 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAT TAACGCCAAG TATGGTCGCA GAACTATCTT CGATTGCTTA CGATGTACAA 
AAGCAGTCAG TCTTAAAAAG AAATATTATT AATGTCAGCA TTAATCTAGA AAAACACTTC
AATTTTAATG TATCACCGAA ACCTGTAATG GGAACTTCTG GGGGTTATGT TGCAAAAGCA
AGAAACCAAC AGACCGGGTT TGCCTTAATA GGACAAGGGC AAAGCGAACA ATATAAGGAT
GATATTGTCA TTGCAGTACG CGGGACTAAT TTTGCCAGTT TAAATGATTT ATCAACCGAT
GCTCGCGCTT CCACAAGTTC TACCGAACTT GGTGCGTTAG TACATTCAGG TTTTAATTCC
GTTTTTGAGT CAATGAAAAA AGAGCTATTG CCTTATATAA ATATGCTTCC AGCAAATGCA
ACACTCCATT GCGTTGGACA CAGTTTAGGC GGAGCTATAG CGACTTTGAT TGCCGACTGG
GCAAAGCAAA AACTTCTTAA TGTTAAACTA TATAGTATCG GTGCTCCTAA AGTTGGGTTT
GCCGATTTTG CACTTAAGCA CACAAATTCT CTGGGGCAGG AAAATATATT CCGCTGCACC
AAAGGTTGCG ATCCTGTCCC GATGGTTCCA GTCTGGCCTT TCGTTCATGC GCCATATAAT
GGTTATGAAT ATAGAGTTGA TAACTCAGGC TTTGTAAACC CAATAAAACA CAAAGTTAAA
TATTATATAG AGGATATGAA AAGCAGCGAC TGGAATTCAT ATCAACGAAA AATCAGTTTT
AATAGTCACA AAAGAGTAAC GTTAGATGCT CGTTTAAGCC ATCAAGTCAG TCGTGATTTA
TTTTGGATGA ATCGCTTAAG CGAAGCATTA TTAACACTAT TACGTCAACT AGGTCATGGC
ATTGCTTCAC GCTTACAAAG CGGTATCGCC AATGGTTTAA ACTTTTATGA CCAAATCGCC
ATGGTGTTAT CTGATGTCAC TTTGCATAAT GCAACGTTTA CTGGGCAATT AAATGGTCTA
TTAGCTCACA TGTTAGTGTT TGCAGGTCAT GCTACCCGTA AAGTAGAAAC TCTAAGCTAT
GAGTTTATTA GTTGGGTGTT TAAAAAAACG ATTCAAGTTG TTAATCGATT AGCGCGCGAA
GCACTGAACT AA
 
Protein sequence
MNKLTPSMVA ELSSIAYDVQ KQSVLKRNII NVSINLEKHF NFNVSPKPVM GTSGGYVAKA 
RNQQTGFALI GQGQSEQYKD DIVIAVRGTN FASLNDLSTD ARASTSSTEL GALVHSGFNS
VFESMKKELL PYINMLPANA TLHCVGHSLG GAIATLIADW AKQKLLNVKL YSIGAPKVGF
ADFALKHTNS LGQENIFRCT KGCDPVPMVP VWPFVHAPYN GYEYRVDNSG FVNPIKHKVK
YYIEDMKSSD WNSYQRKISF NSHKRVTLDA RLSHQVSRDL FWMNRLSEAL LTLLRQLGHG
IASRLQSGIA NGLNFYDQIA MVLSDVTLHN ATFTGQLNGL LAHMLVFAGH ATRKVETLSY
EFISWVFKKT IQVVNRLARE ALN