Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_3132 |
Symbol | |
ID | 4280035 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 3749009 |
End bp | 3750160 |
Gene Length | 1152 bp |
Protein Length | 383 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 638135951 |
Product | lipase, class 3 |
Protein accession | YP_751808 |
Protein GI | 114564294 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.95393 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAAT TAACGCCAAG TATGGTCGCA GAACTATCTT CGATTGCTTA CGATGTACAA AAGCAGTCAG TCTTAAAAAG AAATATTATT AATGTCAGCA TTAATCTAGA AAAACACTTC AATTTTAATG TATCACCGAA ACCTGTAATG GGAACTTCTG GGGGTTATGT TGCAAAAGCA AGAAACCAAC AGACCGGGTT TGCCTTAATA GGACAAGGGC AAAGCGAACA ATATAAGGAT GATATTGTCA TTGCAGTACG CGGGACTAAT TTTGCCAGTT TAAATGATTT ATCAACCGAT GCTCGCGCTT CCACAAGTTC TACCGAACTT GGTGCGTTAG TACATTCAGG TTTTAATTCC GTTTTTGAGT CAATGAAAAA AGAGCTATTG CCTTATATAA ATATGCTTCC AGCAAATGCA ACACTCCATT GCGTTGGACA CAGTTTAGGC GGAGCTATAG CGACTTTGAT TGCCGACTGG GCAAAGCAAA AACTTCTTAA TGTTAAACTA TATAGTATCG GTGCTCCTAA AGTTGGGTTT GCCGATTTTG CACTTAAGCA CACAAATTCT CTGGGGCAGG AAAATATATT CCGCTGCACC AAAGGTTGCG ATCCTGTCCC GATGGTTCCA GTCTGGCCTT TCGTTCATGC GCCATATAAT GGTTATGAAT ATAGAGTTGA TAACTCAGGC TTTGTAAACC CAATAAAACA CAAAGTTAAA TATTATATAG AGGATATGAA AAGCAGCGAC TGGAATTCAT ATCAACGAAA AATCAGTTTT AATAGTCACA AAAGAGTAAC GTTAGATGCT CGTTTAAGCC ATCAAGTCAG TCGTGATTTA TTTTGGATGA ATCGCTTAAG CGAAGCATTA TTAACACTAT TACGTCAACT AGGTCATGGC ATTGCTTCAC GCTTACAAAG CGGTATCGCC AATGGTTTAA ACTTTTATGA CCAAATCGCC ATGGTGTTAT CTGATGTCAC TTTGCATAAT GCAACGTTTA CTGGGCAATT AAATGGTCTA TTAGCTCACA TGTTAGTGTT TGCAGGTCAT GCTACCCGTA AAGTAGAAAC TCTAAGCTAT GAGTTTATTA GTTGGGTGTT TAAAAAAACG ATTCAAGTTG TTAATCGATT AGCGCGCGAA GCACTGAACT AA
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Protein sequence | MNKLTPSMVA ELSSIAYDVQ KQSVLKRNII NVSINLEKHF NFNVSPKPVM GTSGGYVAKA RNQQTGFALI GQGQSEQYKD DIVIAVRGTN FASLNDLSTD ARASTSSTEL GALVHSGFNS VFESMKKELL PYINMLPANA TLHCVGHSLG GAIATLIADW AKQKLLNVKL YSIGAPKVGF ADFALKHTNS LGQENIFRCT KGCDPVPMVP VWPFVHAPYN GYEYRVDNSG FVNPIKHKVK YYIEDMKSSD WNSYQRKISF NSHKRVTLDA RLSHQVSRDL FWMNRLSEAL LTLLRQLGHG IASRLQSGIA NGLNFYDQIA MVLSDVTLHN ATFTGQLNGL LAHMLVFAGH ATRKVETLSY EFISWVFKKT IQVVNRLARE ALN
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